barSeed - Barley Seed Development Database

Probe ABC02671

Source Contig ABC02671

barSeed

Links

Affymetrix Source Sequence (1255 bp)

>ABC02671 1255
GACCAACGAACCAATCCATCCACCTCCTCCTAGCTCAGCTCATCAGCTACCCACACTTCA
CTCCCTGAGTAGTAGCAGCAGCGAGAAGGGAAGATCGATAGAGTAGAGCGAGGTGCGAGA
TGAGGACGGTGGAGCTCGGCATTGTGGCCATGGCGTGCCTCGTGGCGGTGGCGCGGGCCG
GCAACTTCTTCCAGGACTCGGAGATGTCCTGGGGGGACGGACGCGGGAAGGTCGTCGACG
GCGGCCGCGGGCTCGACCTCACGCTCGACAAGACCTCCGGCTCCGGCTTCCAGTCCAAGA
GCGAGTACCTCTTCGGCAAGATCGACATGCAGATCAAGCTCGTCCCCGGCAACTCCGCCG
GCACCGTCACCACCTTCTACCTGTCGTCGCAGGGGACGGCGCACGACGAGATCGACTTCG
AGTTCCTGGGCAACGTCACCGGCGAGCCCTACACGCTGCACACCAACGTGTTCGCGCAGG
GGCAGGGGCAGCGGGAGCAGCAGTTCCGCCTCTGGTTCGACCCCACCAAGGCCTTCCACA
CCTACTCCATCATCTGGAACCCGCAGCACGTCATATTCGCGGTGGACGGCACGGCGATCA
GGGACTTCAAGAACCACGAGGCGCGGGGCGTGTCGTTCCCCAAGAGCCAGCCGATGCGGC
TGTACGCGAGCCTGTGGAACGCCGACGACTGGGCCACGCAGGGCGGCCGGGTCAAGACCG
ACTGGAGCAAGGCGCCGTTCGTCGCCTCCTTCCGCAACTTCAACGCCGACGCCTGCGTCA
TGTCCGGCGGCGCGCAGCGCTGCCCCGCCGGCACCATGGAGGCCTCGGCGGCCGGCGGCG
GCAGCTGGTGGAACCAGGAGCTCAGCGGCATGGGGTATCGCCGCATGCGGTGGGTGCAGA
GGAAGTTCATGATCTACAACTACTGCACCGACCCCAAGCGGGTGGCGCAGGGCGTGCCCG
CCGAGTGCAAGCTCCGCTGATGAGAATGGGATCCTCCAGCTGCAGCAGCTTTACAAGAAC
AACGCATGAACCATGAGATGTGTTTGGTTTCGGCTTTCGGTCTTCGAGAACCAAGGAAGC
GCGCGCATCAGAGCTCTGTCGGATGATGTAAATGTAGTACGTACCGTAGTAGTAGCATGC
ATATCGCATTCTTTCATTTGTGTCTGTTGTTACGCGGGATCGATCCATGTACGTACTTAT
GCAAGTTCTATAATTAGCCCGTTCCTTTTAGCCTTGAAAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_18499.1	1606	0.0	1 - 1219	99	1209 / 1219	None	ABC02669 ABC02670 ABC02671 ABC02672 ABC02673 ABC12692
AK368228	1175	0.0	81 - 862	83	650 / 786	CUST_5619_PI390587928 CUST_35729_PI390587928	ABC02669 ABC02670 ABC02671 ABC02672 ABC02673 ABC29512 ABC40934
AK358343	1089	0.0	157 - 938	83	650 / 786	CUST_40519_PI390587928 CUST_35729_PI390587928	ABC02669 ABC02670 ABC02671 ABC02672 ABC02673 ABC29512 ABC40934
AK357837	1341	4e-178	202 - 983	82	641 / 785	CUST_337_PI415269222 CUST_38624_PI390587928	ABC02669 ABC02670 ABC02671 ABC02672 ABC02673 ABC40934
MLOC_62330.1	769	6e-142	370 - 769	90	358 / 400	CUST_35729_PI390587928	ABC02669 ABC02670 ABC02671 ABC02672 ABC02673
MLOC_56250.1	1376	2e-126	427 - 1001	81	472 / 581	CUST_336_PI415269222	ABC02669 ABC02670 ABC02671 ABC02672 ABC02673
MLOC_71977.1	1134	1e-83	249 - 719	79	376 / 475	None	ABC02669 ABC02670 ABC02671
MLOC_1309.1	315	5e-83	1 - 231	91	210 / 231	None	ABC02669 ABC02670 ABC02671 ABC02673
MLOC_71749.1	3033	3e-75	2116 - 2649	77	416 / 540	CUST_17027_PI390587928 CUST_334_PI415269222 CUST_27592_PI390587928	ABC02671 ABC12692
MLOC_1309.2	414	4e-74	133 - 326	93	180 / 194	None	ABC02669 ABC02670 ABC02671 ABC02673