barSeed - Barley Seed Development Database

Probe ABC02093

Source Contig ABC02093

barSeed

Links

Affymetrix Source Sequence (769 bp)

>ABC02093 769
GCCGCCGCCGCCGCCGCCGCCCTCGAAGCCCCTGCGACCGGAGCTCTCCAGACCTCTTCC
TCCGCCGTCAGCCCGGAGATCTCCCGGCTTCTCCCTCCGCCATCATGGGGAAGACACGTG
GTATGGGAGCTGGGCGCAAGCTCAAGACCCACCGCAGGAACCAGAGGTGGGCTGATAAGG
CATACAAGAAGAGCCACTTGGGCAATGAGTGGAAGAAACCCTTTGCTGGATCGTCTCACG
CCAAGGGCATTGTCTTGGAGAAGATTGGTATTGAGGCCAAGCAGCCTAACTCTGCCATCC
GTAAGTGTGCTCGTGTCCAGCTGGTGAAGAACGGGAAGAAGATTGCTGCCTTTGTGCCTA
ACGATGGTTGCCTGAACTTCATCGAGGAAAACGACGAGGTGCTGATTGCTGGGTTTGGTC
GTAAGGGTCACGCCGTGGGTGATATCCCTGGTGTCAGGTTCAAGGTTGTCAAGGTATCTG
GTGTGTCCCTGCTGGCTCTCTTCAAAGAGAAGAAGGAGAAGCCCAGGTCTTAGATTGCAT
TTTTTTTATAGGCAAGGATGGAATGCACTGTTAAGGCTCTTGGATGTTTGAGGAGGAAAG
CTGCCTGCTATGTTTACAATGTCCTATATAACCTGAAGTTGTACTAGCGAGATTTGTTCC
TTCTCTGCTGTTGCTTTCTCTTAGCAGTTGCTATTAAGAGTTTTGTTTCCATGATCTGGA
TATATATTAATGCTGTGTTACTTTGCTGCTAAAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_23693.1	820	0.0	113 - 820	100	708 / 708	CUST_4875_PI390587928	ABC02092 ABC02093 ABC02094 ABC02097 ABC02098
MLOC_78806.2	629	5e-175	56 - 496	92	405 / 441	None	ABC02092 ABC02093 ABC02094 ABC02097 ABC02098 ABC34593
MLOC_78806.1	793	5e-175	69 - 509	92	405 / 441	None	ABC02092 ABC02093 ABC02094 ABC02097 ABC02098 ABC34593
MLOC_75214.1	784	3e-137	301 - 727	87	373 / 427	None	ABC02092 ABC02093 ABC02094 ABC02097 ABC02098 ABC34593
MLOC_75214.2	529	1e-117	157 - 526	88	324 / 370	None	ABC02092 ABC02093 ABC02094 ABC02097 ABC02098 ABC34593