barSeed - Barley Seed Development Database

Probe ABC01502

Source Contig ABC01502

barSeed

barSeed Home
List Cluster Sets
List Cell Wall Probes

Links

James Hutton Institute Home
BioSS Home

Affymetrix Source Sequence (539 bp)

>ABC01502 539
TTATATGAGTGTGTAAAAATCATCTTGTAGATCTCTTGAAACAAGTGTCCCAATAGCGTC
GTATTATCAAGATGGACAAGTACCCAACTCCCATCCGTGCAAGAGTCCTACTGCAAGCTC
TACTTCTTCTTCTCATATGTCATGCTACTACTACACAATGTCGAATCATCAATGGCATCG
ATAAGGATAAGATCAATTTACATGGGTTGTGTGTCATAGACAAACCAGTCCTTGGTGACT
ACTGTTGCAAAGTTACGCATGAGTGTTACATAGACCTTCCGACGTGCCTTCAGGAGTGCA
ACAAACCTGCAGGCGTGGTGGCGAAGGCAGCCCCTCCTTCACCTACCGTATTCAGGACAA
ATGGAATTTGATTGGATAACAATATGCGATGTATGAAAAATATTTGAAATAAAAAGAAGT
ATCTCTGTTTTTGTTAAAAAAAAAAAAAAAAATTGCAATTTAATTTTGGGCAGCTGTAGT
GAGTAGGGATCTTCGGAATAACAATATACTATTCTTATTTTTCAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_27042.1	323	2e-147	35 - 323	99	287 / 289	None	ABC01501 ABC01502
MLOC_785.1	336	9e-77	1 - 223	90	205 / 228	None	ABC01501 ABC01502