barSeed - Barley Seed Development Database

Probe ABC01431

Source Contig ABC01431

barSeed

Links

Affymetrix Source Sequence (844 bp)

>ABC01431 844
GCGCACGACACCACCACAAGGCGAGGGACCCGGAGAGAAAAACACCACCACCAAAGGCGC
CCTCCGTCCCTCTGTCCTCTCCTCGCTCGCCGTCCCCAACCTCTCGCTGCAAAAAGGTTG
ATTGTGATGGCATCCAAGCGCATCCTGAAGGAACTGAAGGACCTGCAGAAGGACCCTCCC
ACATCATGCAGTGCAGGCCCTGCTGGTGAGGACATGTTTCATTGGCAAGCAACGATTATG
GGACCCCCTGACAGTCCCTATGCCGGCGGTGTTTTCTTGGTGAACATTCATTTCCCTCCG
GATTACCCCTTCAAGCCGCCAAAGGTATCTTTTAAGACGAAGGTCTTCCATCCTAATATC
AACAGCAATGGAAGCATATGCCTTGATATTCTTAAGGAGCAGTGGAGCCCTGCTTTGACG
ATCTCCAAGGTCTTGCTCTCTATCTGTTCCCTGCTGACTGATCCCAACCCGGATGATCCC
CTGGTTCCCGAGATTGCCCACATGTACAAGACCGACCGGTCAAAGTACGAGACGACAGCC
CGCAGCTGGACGCAGAAGTACGCCATGGGTTGAAGACCTGCATCGTGGACAACTGAAATG
TCGCTTCAAGAAAAATATTTATGGGCCATTGTTTCTTCGATTTGTTGCTGGTTGTGTGTA
ATCCGATCCTCAAGGATTGTAAATTGCATTCGGCGTCGGCCCTATCATCAATTGCCACTA
GTATTGGCAGACATGCATGCCTATCACCCTATGCACCTATGCTTGTTGGGTTAACCTTCA
TCAGTGTTGGTGTTATTTGGTAAATGTTCATTAAACATGTTTGCTTCAAAAAAAAAAAAA
AAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK251871.1	814	0.0	8 - 814	99	807 / 809	CUST_9052_PI390587928	ABC01431 ABC01433 ABC01437 ABC45712
AK252249.1	810	0.0	80 - 807	100	728 / 728	CUST_9052_PI390587928 CUST_25376_PI390587928	ABC01431 ABC01433 ABC01437 ABC45712
MLOC_19292.1	656	0.0	248 - 656	100	409 / 409	CUST_9052_PI390587928	ABC01431 ABC45712
MLOC_58599.1	922	1e-136	313 - 759	86	386 / 447	CUST_25379_PI390587928	ABC01431 ABC33668 ABC41396 ABC45712
MLOC_44650.1	295	8e-124	55 - 295	100	241 / 241	None	ABC01431
AK365157	925	5e-106	146 - 588	82	365 / 443	CUST_9051_PI390587928	ABC01431 ABC01433 ABC01437 ABC38051 ABC38694
MLOC_70097.1	734	5e-106	213 - 655	82	365 / 443	CUST_9051_PI390587928	ABC01431 ABC01433 ABC01437 ABC38694
MLOC_44650.2	312	3e-54	197 - 312	100	116 / 116	None	ABC01431