barSeed - Barley Seed Development Database

Probe ABC00969

Source Contig ABC00969

barSeed

Links

Affymetrix Source Sequence (922 bp)

>ABC00969 922
ATTAGTTTCACCGTTTGGGATGTCGGGGGTCAGGACAAGATCAGGCCCCTGTGGAGGCAC
TACTTTCAGAACACCCAGGGTCTCATTTTTGTCGTGGACAGCAACGACAGAGAGCGTGTT
GTTGAGGCCAGAGATGAGCTCCACCGGATGCTGAATGAGGATGAGCTGCGTGATGCTGTC
CTGCTGGTGTTTGCAAACAAGCAAGATCTTCCTAATGCCATGAATGCTGCTGAAATCACT
GACAAGCTTGGCCTGCATTCCCTGCGTCAGCGACACTGGTATGATTTTATGGTGAATGGA
AGTTTGCGGATTGTTGCACTAGAGTTTTATGATTTGATCTCCAATAGCAAGGCCTATCTA
AAATACTAAGTAGATTTTTCTAAATGGGAAGCAACAAAACATGAGTGAACCACTTAGTGG
TGGTACTACTATTGTTACACAAATTAAGAAAGCTTATTTCCAAACCAAGTAAAGTACTCA
TCTTACACAATCCAACCTATGTTCTATGTCCTTCTCCAATATGACTTGATTTTTCTATAT
GTGATTTGAACTTGTGCTCTGATAATCATTTCAGGTACATCCAGAGCACATGTGCTACCT
CTGGGGAGGGGTTGTATGAGGGGCTTGACTGGCTGTCCAACAACATTGCCAACAAGGCTT
GAAGCATCTCGGCAGGGGCTTCTATGGATCTGGATAAGCTGGATATTCGGACTAATGCTG
CCTTTACGTATTATAAACTATATAGTCTTGACAGATAATGTGGGTGTTTTGGAAGGATAA
AGCTCTTTGTGAAAGAGCTAGCTATCAGATTGTTTTCGTGGGTGTTTAATTGTCTGGTGC
TGTTTGTTTTCCCCATCGTGGTCTTTACTATGTCAGCTCTGTACTCGCCACTCCGACAGA
CATCAGACATTGAGTATTACCT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK252968.1	1082	5e-146	359 - 639	100	281 / 281	CUST_6574_PI390587928	ABC00200 ABC00395 ABC00969 ABC01008 ABC49757
MLOC_71884.1	1026	5e-146	338 - 618	100	281 / 281	CUST_6574_PI390587928	ABC00200 ABC00395 ABC00969 ABC01008 ABC49757
AK252168.1	1324	1e-97	724 - 998	90	248 / 275	CUST_39517_PI390587928	ABC00093 ABC00181 ABC00200 ABC00395 ABC00652 ABC00969 ABC25131 ABC45765
MLOC_72618.1	926	1e-97	238 - 512	90	248 / 275	None	ABC00093 ABC00181 ABC00200 ABC00395 ABC00652 ABC00969 ABC45765
MLOC_72618.2	1123	1e-97	389 - 663	90	248 / 275	CUST_39517_PI390587928 CUST_2000_PI390587928	ABC00093 ABC00181 ABC00200 ABC00395 ABC00652 ABC00969 ABC45765
AK251040.1	988	6e-96	321 - 595	90	247 / 275	CUST_39487_PI390587928 CUST_35161_PI390587928	ABC00093 ABC00181 ABC00200 ABC00395 ABC00969
MLOC_33833.2	926	6e-96	318 - 592	90	247 / 275	CUST_35161_PI390587928	ABC00093 ABC00181 ABC00200 ABC00395 ABC00969
MLOC_33833.1	1336	3e-94	632 - 906	89	246 / 275	CUST_35161_PI390587928 CUST_39487_PI390587928	ABC00093 ABC00181 ABC00200 ABC00395 ABC00969