barSeed - Barley Seed Development Database

Probe ABC00697

Source Contig ABC00697

barSeed

Links

Affymetrix Source Sequence (1766 bp)

>ABC00697 1766
GAAAGCTCGGAAGGCTCTCCTCTTCCCCCAAACCCAACCATGGCCGACGCCGCCGACCCC
GCCGCCGGCCAGAACCCTAAGGTCGCCGGGAACCACGTGCCCGAGCCCTGGGCTGGCGCC
GATGGAGAAGTCGCCGAGGAGGAGTTCGAGTACGAGGACGAGGAGGAGGAAGAGCTGGAC
GAGCCGGCGGCCGCAGCCCTCGAGCGGGAGAAGGTGCAGTCCGTGTTCCGGAGGCTCAGC
TCGGACCCCGTGGGGATCCGCGTCCACGACGTCATCATCAGGGGCAACGCCAAGACGCGG
GAGGAGCTCATCGAGGCGGAGGTCGCCGACCTCATCCGCTCCGCCACCACCGTGCAGGAC
CTGCTGAGCGCCGCGGCCGAGGCCAGCGCGCGGCTCCGCGGGCTCGACGTGTTCGAGGCC
GTCAACATCACGCTCGATGCCGGCCCGCCCGAGCTGCCCGGCACCACCAACGTCGTCATT
GAGGTTGTCGAGCCCTCCATCCCCATCAGCGGTAACGCCGGCGTCTACTCAAAGCCCGAG
GCAAAAGCGTGGTCACTGGAAGGGGCCGTTAAGTGGAAGAATTTGGCTGGCTATGCAGAC
ATCTGGGATGCTTCGGTTGCATATGGTTGGGACCAAACAACAGAGGTTGGCGTTGGAGTC
TCACTGCCAAGATTTAAATCAATACCAACACCCTTGATGGCTCGGGCTTCATTGTTGTCA
CAAGATTGGCTGAAGTTCTCATCATACAAGGAGCGCCTACTTGGTCTTTCATTTGGTTTG
CTTTCAACCAGGCACCATGATTTATCTTACAACCTTACATGGCGTACCTTAACTGATCCA
TCACGCCTCGCGTCAACATCCATAAGAAGGCAGTTAGGGCATAACCTTCTATCTGCATTG
AAATATACATACAAGATTGATGAAAGGGATTCACATATCAGGCCAACAAAAGGATATGCA
TTTCTCTCAACCTCTCAAGTTGGTGGTCTTTGGGACAACAAAGGATTGAAATTTTTTCGC
CAGGAGTTTGATGTTCGTGCTGCTGTGCCTTTTGGATTCTGGAATGCTGCTCTCAATGTT
GGTGTAGGAGCGGGTGTTATTCTACCACTGTCAAGGGGATTTATGAACTCGTCTACACCT
GTGACTGATAGATTTAACCTTGGAGGCCACTCTTCTCCAGTTTGCAGCCTGGGTGGAATA
TCATCCCTATTGGGTTTCAGAACAAGAGGAGTTGGCCCGACAGAACCGGGGACAAGCCTC
CGGCACCAGCCTCCTCACTCCTCACAGCACATCGCTTTCCTTCCCTCGCCACCGCCCACC
AAGGAAAGGAGCATGTCTTGCTGCGGCGGCAAGTGCGGGTGCGGCGCCGGCTGCCAGTGC
GGCACCGGCTGCGGCGGGAGCTCCGGCGGGTTCGAGATGGCCGGCGGGGAGACCGGCGGC
TGCGACTGCGCCACCTGCAAGTGCGGCACCGCGTGCGGCTGCTCCTGCTGCAGCTGCAAG
TGAGCCGGCGCCCGGGAGGCCGGCCGGCAGAGGCGAGCACGAGGATGAGAGGAGGACAAG
CAACACCAACCAAGCACCATCACCATCGCCATCGTATCATCAGTAGCCGCTGCATGCGCG
CGCGCTGAATAAAATAAAACCGCCGTCGTGTTCGTTAGTTCTGTATGCCCTGCGTGTAGC
GTTCGACCAGTGTGTCCTTCCTCATGCCTCCGATCCGAAATATACATGGCGCCTCAGCTT
TGATCCCGTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK354185	1724	0.0	2 - 1116	99	1114 / 1115	CUST_32601_PI390587928 CUST_32603_PI390587928	ABC00697 ABC00768 ABC38927
MLOC_36443.1	1406	0.0	1 - 758	99	757 / 758	CUST_32601_PI390587928 CUST_32603_PI390587928	ABC00697 ABC00768 ABC38927
MLOC_22909.1	529	0.0	164 - 529	99	365 / 366	None	ABC00697
MLOC_65461.1	816	1e-64	296 - 430	100	135 / 135	None	ABC00162 ABC00616 ABC00697 ABC00943 ABC32830
MLOC_9037.1	266	1e-120	7 - 266	97	252 / 260	None	ABC00697
MLOC_1285.1	192	1e-79	4 - 192	95	180 / 189	None	ABC00697
MLOC_77383.1	182	1e-75	1 - 182	95	173 / 182	None	ABC00697
MLOC_32312.1	555	1e-74	65 - 264	93	185 / 200	None	ABC00387 ABC00616 ABC00697
MLOC_30238.1	502	3e-51	131 - 270	94	131 / 140	CUST_40624_PI390587928	ABC00697 ABC00943
MLOC_28885.2	684	3e-51	233 - 372	94	131 / 140	None	ABC00387 ABC00697 ABC00943