Morex Pseudomolecules and MLOC locations

The CDS of the predicted MLOC transcripts were mapped onto the Morex pseudomolecules with GMAP. Matches were filtered requiring at least 98% identity and 50% alignment length with the pseudomolecule, and the best match for each MLOC was stored. At present 75,300 MLOC transcripts have a given location on the pseudomolecules (including chrUn).

Using the forms below, you can check a list of MLOC transcript Ids for locations on the pseudomolecules, find other MLOCs surrounding a given MLOC transcript or between two MLOC transcripts as well as extract genomic sequence from these regions of the pseudomolecules.

PseudomoleculePseudomolecule length (Mbp)# MLOC transcripts located on pseudomolecule
1H558.59058
2H768.110999
3H699.711570
4H647.18895
5H670.011740
6H583.48832
7H657.211739
chrUn249.82466

Retrieve table of MLOC transcript pseudomolecule locations

List of MLOC transcript IDs (separated by whitespace please):





Retrieve genomic sequence and other MLOCs around a given MLOC transcript

MLOC transcript you are interested in:

Range around the MLOC: +/-   kbp of adjacent sequence




Retrieve genomic sequence and other MLOCs between two given MLOC transcripts

Between MLOC transcripts:

  and