- Transcript HORVU7Hr1G057140.26
- Transcript IDHORVU7Hr1G057140.26
- Gene IDHORVU7Hr1G057140
Exon Structure of HORVU7Hr1G057140.26
Chromosome | Exon | Start | Stop | Direction |
---|---|---|---|---|
chr7H | 1 | 244649246 | 244649160 | + |
chr7H | 2 | 244649654 | 244649354 | + |
chr7H | 3 | 244649826 | 244649745 | + |
chr7H | 4 | 244649975 | 244649908 | + |
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
Homology to Model Species (BLASTX to E-value < 1e-30)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Rice PP7 | LOC_Os08g43400.1 | +2 | 9e-74 | 169 | 81/89 (91%) | protein|kinesin motor domain containing protein, expressed |
TAIR PP10 | AT3G51150 @ ARAPORT AT3G51150.1 @ TAIR |
+2 | 4e-63 | 145 | 69/89 (78%) | Symbols: | ATP binding microtubule motor family protein | chr3:19002006-19006509 FORWARD LENGTH=1052 |
BRACH PP3 | Bradi3g42190.1.p | +2 | 9e-76 | 173 | 84/89 (94%) | pacid=32814334 transcript=Bradi3g42190.1 locus=Bradi3g42190 ID=Bradi3g42190.1.v3.1 annot-version=v3.1 |
Barley PseudoMolecules GBrowse
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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
CDS Sequence (538 bp)
>HORVU7Hr1G057140.26 538 150831_barley_pseudomolecules GGGTGTTTGGCCCCAATTGCTCTACCAGACAGGTCTACGAGGAAGGAGCAAAAGAAGTTG CTCTATCAGTTGTCAGTGGAATCAACTCAAGCATATTTGCGTATGGGCAAACAAGCAGCG GAAAGACTTACACAATGACTGGAATTACTGAGTACAGTGTGATGGACATTTATGACTACA TAGAGAAGGTGTGCGTGTGCGTATGCGTGGCACGGATGATGTTATACTTCACTTCGCGAG ATGATATTTGCCTCATTGTTTGTCATTGCTACAGCACCCTGAAAGAGAATTCATGCTGAA ATTCTCAGCAATAGAGATATATAATGAAGCTGTGAGGGATCTTCTGAGCCATGATACGAC ACCTCTTAGACTGCTTGACGATCCTGAGAAAGGGACTACTGTTGAAAAGCTTACCGAGGA AACATTGAGGGACAAGGACCATCTTAGGGATCTTCTTGGAATGTGTGAAGCTCAAAGAGA GATTGGAGAAACGGCTTTGAACGAAGCGAGTTCTAGGTCCCACCAAATACTCAGGCTG