- Transcript HORVU5Hr1G068200.22
- Transcript IDHORVU5Hr1G068200.22
- Gene IDHORVU5Hr1G068200
Exon Structure of HORVU5Hr1G068200.22
Chromosome | Exon | Start | Stop | Direction |
---|---|---|---|---|
chr5H | 1 | 516505090 | 516504114 | + |
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
Homology to Model Species (BLASTX to E-value < 1e-30)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Rice PP7 | None | - | - | - | - | - |
TAIR PP10 | None | - | - | - | - | - |
BRACH PP3 | None | - | - | - | - | - |
Barley PseudoMolecules GBrowse
Click here to see more tracks within GBrowse -->
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
CDS Sequence (977 bp)
>HORVU5Hr1G068200.22 977 150831_barley_pseudomolecules ATCAAGCACCACAAATGCCATGCTTTAGCTCTTGACAACGGGACCTGTTTTTTCCTTTCT CTTCAGGGATCTGGAGGACCTAGGTTCACTCTTCAGGCCCTTCAGCAGGGAAGTCCGGGT GAAGTTCAGACAGAGACTCACTCTGTGAGTGAAGAATCCAAACAATCCTCAACTCACCCC CGTCGCATTTTCAGAAGAATATGCCGCTTGCGGCCTGAGCAGGGACCATGCGTGCGCTGG CTCTCACCATATGGCTCTGCTCATCTGCGCAATCTGCCAAGGGGACAAGAGAAAATGGAG GCACCGAGGAAAAGGAGCGATGGTGCCTCTGCGTCACCACATGCACCGACCCGGCAGGCC AGCAGCTAGCACAATGGTAAACAGGTGAAGGCCTCCTTTATCGTTGGCCTTTGCTGGTCC TGTAGTTGCTTCAGGTGTAGCCCATTTGGGTGGGATTGGATGTACGCCACCATAGAACAT TATTAGTATTATTATTTTGCTGCAATCGTTGCTGCTCTCGTGTCTTTACTTTGAGCTGTA GGAGATGCTTCCTCAGGAGGGAAAAAAAAGGTGAACCAGATAAGGCGTTTTGCAGCTTTC CAGCGTTCAGATAGAAAGCAAGCGTCGGGATAGAAAGTGTCCTACGACCACGAAGTGAGG TTCCTCCCGTGACTTGACCCTCGTGCACCCTCACCCGTAGGCCGAAAGAAAGCAACGTTA TGCAGGTCCAAACAAAACCGGATGCTTTTTGGCTGACAAGTTACCACATGATGTCACGTC ACAAACAAAATCGATTGATTGTCAGTATAATTCACCTGTGGCCGCCCACGAGTTAGAAAT GACAAGGTGGCATGACACTTTCTTTGGAGCAATTCTAGCGGACCCACTACGTCGCCAAAC ATAATTCTTGTTTTCTTAGAGGTTGTTAGCATATGGCGTAGCTTCGTCTTACTTGCGAGG TGCCAAACAAGAGAAAT