Probe CUST_9484_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_9484_PI426222305 | JHI_St_60k_v1 | DMT400006362 | TGTTATGCTTGTATTTGTTTAAGCCAGTGTGATCTGCCGATGCCCCCTGTTGGATCCTTA |
All Microarray Probes Designed to Gene DMG400002484
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_9173_PI426222305 | JHI_St_60k_v1 | DMT400006360 | GTCCATAACCTGGCATGGTTGTTTTCTATTTAATGCTTTAAATACCTCAATCCAAAGAGT |
| CUST_9265_PI426222305 | JHI_St_60k_v1 | DMT400006357 | TACCCGGTGTAATCCCACAAGTGGGGATATGCAATCTCTAGTAAATTATTTATGTATTTA |
| CUST_9409_PI426222305 | JHI_St_60k_v1 | DMT400006363 | GCTAACACCTGCTAAATCTAAGATTGCTTCCTCCTTTGTGTGCTTTAGTCATCTTATTTT |
| CUST_9484_PI426222305 | JHI_St_60k_v1 | DMT400006362 | TGTTATGCTTGTATTTGTTTAAGCCAGTGTGATCTGCCGATGCCCCCTGTTGGATCCTTA |
| CUST_9401_PI426222305 | JHI_St_60k_v1 | DMT400006359 | ACATGTGTTAATGTGCTTTCAGTGCAAATCCAGGATTTACACCTAATGCGTATAGCTTTT |
| CUST_9199_PI426222305 | JHI_St_60k_v1 | DMT400006361 | TTCTTAATCTGATCCTCTGGATATCTGCTTGGACCACACCAGGCAGTGTTAGAAGTAGTG |
Microarray Signals from CUST_9484_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 7.00446 | 3.10279 | 0.933563 | 0.432866 |
| ABA 1h | 6.26199 | 3.05031 | 0.94093 | 0.480573 |
| ACC 1h | 7.00946 | 3.40163 | 0.899439 | 0.461 |
| BABA 1h | 5.70903 | 3.31663 | 0.805208 | 0.467154 |
| Chitin 1h | 6.79179 | 3.19623 | 1.00023 | 0.495236 |
| Epi 1h | 10.4091 | 4.81917 | 1.34531 | 0.683172 |
| SA 1h | 6.81616 | 3.14976 | 0.869489 | 0.433928 |
| Me-JA 1h | 5.58181 | 3.24913 | 0.928013 | 0.538683 |
| Control 6h | 13.6273 | 5.43142 | 1.56585 | 0.789087 |
| ABA 6h | 9.5866 | 3.47554 | 1.22401 | 0.444731 |
| ACC 6h | 11.1269 | 4.05758 | 1.20021 | 0.487466 |
| BABA 6h | 11.1754 | 3.81231 | 1.29563 | 0.490637 |
| Chitin 6h | 11.3312 | 3.69982 | 1.34102 | 0.523366 |
| Epi 6h | 8.47616 | 3.81347 | 0.990791 | 0.47145 |
| SA 6h | 9.09898 | 3.53867 | 1.21353 | 0.503482 |
| Me-JA 6h | 14.3419 | 5.61279 | 1.64269 | 0.634086 |
Source Transcript PGSC0003DMT400006362 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G54160.1 | +1 | 3e-34 | 130 | 66/102 (65%) | nuclear factor Y, subunit A5 | chr1:20217581-20218706 REVERSE LENGTH=308 |