Probe CUST_9199_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_9199_PI426222305 | JHI_St_60k_v1 | DMT400006361 | TTCTTAATCTGATCCTCTGGATATCTGCTTGGACCACACCAGGCAGTGTTAGAAGTAGTG |
All Microarray Probes Designed to Gene DMG400002484
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_9173_PI426222305 | JHI_St_60k_v1 | DMT400006360 | GTCCATAACCTGGCATGGTTGTTTTCTATTTAATGCTTTAAATACCTCAATCCAAAGAGT |
CUST_9265_PI426222305 | JHI_St_60k_v1 | DMT400006357 | TACCCGGTGTAATCCCACAAGTGGGGATATGCAATCTCTAGTAAATTATTTATGTATTTA |
CUST_9409_PI426222305 | JHI_St_60k_v1 | DMT400006363 | GCTAACACCTGCTAAATCTAAGATTGCTTCCTCCTTTGTGTGCTTTAGTCATCTTATTTT |
CUST_9484_PI426222305 | JHI_St_60k_v1 | DMT400006362 | TGTTATGCTTGTATTTGTTTAAGCCAGTGTGATCTGCCGATGCCCCCTGTTGGATCCTTA |
CUST_9401_PI426222305 | JHI_St_60k_v1 | DMT400006359 | ACATGTGTTAATGTGCTTTCAGTGCAAATCCAGGATTTACACCTAATGCGTATAGCTTTT |
CUST_9199_PI426222305 | JHI_St_60k_v1 | DMT400006361 | TTCTTAATCTGATCCTCTGGATATCTGCTTGGACCACACCAGGCAGTGTTAGAAGTAGTG |
Microarray Signals from CUST_9199_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 5.46702 | 3.16917 | 0.933333 | 0.540449 |
ABA 1h | 5.23374 | 3.03144 | 1.01099 | 0.585454 |
ACC 1h | 5.9568 | 3.45236 | 0.990511 | 0.573579 |
BABA 1h | 5.72364 | 3.31963 | 1.01327 | 0.586739 |
Chitin 1h | 5.46534 | 3.18276 | 1.04418 | 0.598278 |
Epi 1h | 5.37173 | 3.1168 | 1.06483 | 0.613001 |
SA 1h | 5.34059 | 3.09682 | 0.887388 | 0.513895 |
Me-JA 1h | 5.54919 | 3.22839 | 1.15639 | 0.669564 |
Control 6h | 5.84779 | 3.38927 | 0.99637 | 0.577013 |
ABA 6h | 5.99625 | 3.47722 | 0.963481 | 0.558515 |
ACC 6h | 7.01786 | 4.02592 | 1.02789 | 0.575509 |
BABA 6h | 6.37482 | 3.70355 | 0.970223 | 0.561837 |
Chitin 6h | 6.4131 | 3.71552 | 1.02905 | 0.595845 |
Epi 6h | 6.58254 | 3.85376 | 0.987069 | 0.571568 |
SA 6h | 6.05242 | 3.50512 | 1.04567 | 0.605525 |
Me-JA 6h | 5.76239 | 3.3427 | 0.987541 | 0.57204 |
Source Transcript PGSC0003DMT400006361 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 | AT1G72830.2 | +3 | 2e-37 | 141 | 89/188 (47%) | nuclear factor Y, subunit A3 | chr1:27405699-27407088 REVERSE LENGTH=341 |