Probe CUST_918_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_918_PI426222305 | JHI_St_60k_v1 | DMT400032927 | GGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCTAGAGAGGTTCTCAAGTCATTTT |
All Microarray Probes Designed to Gene DMG400012646
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1300_PI426222305 | JHI_St_60k_v1 | DMT400032924 | GGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCTAGAGAGGTTCTCAAGTCATTTT |
| CUST_771_PI426222305 | JHI_St_60k_v1 | DMT400032926 | GGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCTAGAGAGGTTCTCAAGTCATTTT |
| CUST_918_PI426222305 | JHI_St_60k_v1 | DMT400032927 | GGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCTAGAGAGGTTCTCAAGTCATTTT |
Microarray Signals from CUST_918_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 2832.36 | 458.237 | 3.38283 | 0.323822 |
| ABA 1h | 2080.27 | 566.655 | 2.68279 | 0.868651 |
| ACC 1h | 2117.65 | 317.712 | 2.46921 | 0.236826 |
| BABA 1h | 1282.45 | 364.854 | 1.46875 | 0.370202 |
| Chitin 1h | 847.744 | 105.529 | 1.13886 | 0.065915 |
| Epi 1h | 1351.33 | 142.487 | 1.89154 | 0.193705 |
| SA 1h | 1093.83 | 249.588 | 1.24304 | 0.200569 |
| Me-JA 1h | 553.022 | 58.9636 | 0.820413 | 0.0616167 |
| Control 6h | 973.846 | 291.242 | 1.08976 | 0.270584 |
| ABA 6h | 176.032 | 66.0072 | 0.160588 | 0.112721 |
| ACC 6h | 834.685 | 108.777 | 0.876656 | 0.0508806 |
| BABA 6h | 520.455 | 107.778 | 0.547708 | 0.113051 |
| Chitin 6h | 741.674 | 193.969 | 0.802426 | 0.181757 |
| Epi 6h | 637.391 | 88.4686 | 0.680526 | 0.0892329 |
| SA 6h | 806.893 | 114.746 | 0.981363 | 0.110534 |
| Me-JA 6h | 401.513 | 43.9281 | 0.488703 | 0.0406423 |
Source Transcript PGSC0003DMT400032927 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g093720.2 | +1 | 0.0 | 744 | 449/490 (92%) | genomic_reference:SL2.50ch02 gene_region:49041484-49045270 transcript_region:SL2.50ch02:49041484..49045270- functional_description:Os02g0200800 protein (Fragment) (AHRD V1 *-*- Q0E303_ORYSJ); contains Interpro domain(s) IPR009675 Targeting for Xklp2 |
| TAIR PP10 | AT5G40700.2 | +1 | 7e-24 | 103 | 59/134 (44%) | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27350.1); Has 475 Blast hits to 414 proteins in 93 species: Archae - 0; Bacteria - 43; Metazoa - 127; Fungi - 17; Plants - 143; Viruses - 7; Other Eukaryotes - 138 (source: NCBI BLink). | chr5:16292047-16293443 REVERSE LENGTH=303 |