Probe CUST_777_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_777_PI426222305 | JHI_St_60k_v1 | DMT400052081 | ATGTCTTCAAGGGTCATGGATGGTGCCTGGAAAGAGAAGCCATATGATCATGATGAACAG |
All Microarray Probes Designed to Gene DMG400020217
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_777_PI426222305 | JHI_St_60k_v1 | DMT400052081 | ATGTCTTCAAGGGTCATGGATGGTGCCTGGAAAGAGAAGCCATATGATCATGATGAACAG |
Microarray Signals from CUST_777_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 168.913 | 39.0963 | 2.20402 | 0.351099 |
| ABA 1h | 102.907 | 21.9556 | 1.53012 | 0.24224 |
| ACC 1h | 158.088 | 54.5223 | 1.74426 | 0.810909 |
| BABA 1h | 175.001 | 10.8477 | 2.48643 | 0.178762 |
| Chitin 1h | 126.074 | 14.5332 | 1.89661 | 0.371234 |
| Epi 1h | 103.753 | 25.658 | 1.54647 | 0.368782 |
| SA 1h | 208.15 | 49.8223 | 2.6312 | 0.720188 |
| Me-JA 1h | 391.313 | 53.1575 | 6.46381 | 0.583605 |
| Control 6h | 53.767 | 20.5026 | 0.577945 | 0.315019 |
| ABA 6h | 11.2282 | 3.99513 | 0.142356 | 0.0533439 |
| ACC 6h | 24.0938 | 4.68341 | 0.2781 | 0.0560782 |
| BABA 6h | 51.2715 | 6.60459 | 0.617291 | 0.0636527 |
| Chitin 6h | 27.7218 | 6.69106 | 0.338989 | 0.0803469 |
| Epi 6h | 33.2564 | 14.1599 | 0.316921 | 0.242202 |
| SA 6h | 27.3923 | 6.11356 | 0.361391 | 0.0639158 |
| Me-JA 6h | 66.3707 | 5.32709 | 0.908427 | 0.0729264 |
Source Transcript PGSC0003DMT400052081 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g093990.2 | +1 | 3e-82 | 264 | 148/197 (75%) | genomic_reference:SL2.50ch02 gene_region:49240169-49241778 transcript_region:SL2.50ch02:49240169..49241778- go_terms:GO:0006139 functional_description:Adenylate kinase family-like protein (AHRD V1 ***- Q38JG0_SOLTU); contains Interpro domain(s) IPR000850 Adenylate kinase |
| TAIR PP10 | AT3G01820.1 | +1 | 2e-31 | 124 | 77/180 (43%) | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:293981-295357 REVERSE LENGTH=263 |