Probe CUST_745_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_745_PI426222305 | JHI_St_60k_v1 | DMT400026179 | AAATACAAACTTGGTTTGCTCACATATCATGATTTGCACATTAGGGACCCGAGAATCATG |
All Microarray Probes Designed to Gene DMG400010090
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_745_PI426222305 | JHI_St_60k_v1 | DMT400026179 | AAATACAAACTTGGTTTGCTCACATATCATGATTTGCACATTAGGGACCCGAGAATCATG |
CUST_1405_PI426222305 | JHI_St_60k_v1 | DMT400026181 | AAATACAAACTTGGTTTGCTCACATATCATGATTTGCACATTAGGGACCCGAGAATCATG |
CUST_1534_PI426222305 | JHI_St_60k_v1 | DMT400026180 | AAATACAAACTTGGTTTGCTCACATATCATGATTTGCACATTAGGGACCCGAGAATCATG |
Microarray Signals from CUST_745_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 18.278 | 6.59474 | 1.52954 | 0.556684 |
ABA 1h | 7.96497 | 3.53109 | 0.848658 | 0.379055 |
ACC 1h | 16.1308 | 4.08636 | 1.42771 | 0.398923 |
BABA 1h | 11.5525 | 4.91417 | 0.963793 | 0.449819 |
Chitin 1h | 7.45402 | 3.43209 | 0.782825 | 0.362581 |
Epi 1h | 10.1322 | 3.6661 | 1.04852 | 0.424947 |
SA 1h | 14.3334 | 4.1333 | 1.18007 | 0.557135 |
Me-JA 1h | 7.12478 | 3.68465 | 0.818333 | 0.430426 |
Control 6h | 18.1464 | 5.85254 | 1.4857 | 0.501286 |
ABA 6h | 14.3803 | 6.06806 | 1.08639 | 0.56836 |
ACC 6h | 14.2164 | 7.08642 | 0.932755 | 0.420922 |
BABA 6h | 20.2481 | 4.42814 | 1.69435 | 0.376842 |
Chitin 6h | 14.5992 | 7.37462 | 1.02622 | 0.524353 |
Epi 6h | 17.4963 | 4.89201 | 1.34767 | 0.417115 |
SA 6h | 30.7269 | 23.7473 | 1.49644 | 1.84268 |
Me-JA 6h | 8.39505 | 3.8632 | 0.773714 | 0.377442 |
Source Transcript PGSC0003DMT400026179 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | Solyc02g089840.2 | +3 | 2e-113 | 347 | 182/197 (92%) | genomic_reference:SL2.50ch02 gene_region:46129231-46130747 transcript_region:SL2.50ch02:46129231..46130747+ functional_description:Transcription factor (AHRD V1 **-- D7MBD5_ARALY); contains Interpro domain(s) IPR006769 Protein of unknown function DUF607 |
TAIR PP10 | AT2G23790.1 | +1 | 5e-54 | 191 | 88/135 (65%) | Protein of unknown function (DUF607) | chr2:10125692-10127455 REVERSE LENGTH=336 |