Probe CUST_61_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_61_PI426222305 JHI_St_60k_v1 DMT400089070 GATGCAATCAAGGAATTGAATATACAGGGCTGTCCAAAATCAATGAGAGTTGTAATTTAC

All Microarray Probes Designed to Gene DMG400038641

Probe IDChip nameTranscript IDProbe Sequence
CUST_61_PI426222305 JHI_St_60k_v1 DMT400089070 GATGCAATCAAGGAATTGAATATACAGGGCTGTCCAAAATCAATGAGAGTTGTAATTTAC


Microarray Signals from CUST_61_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h26.73597.653731.768950.373787
ABA 1h15.64295.278091.081450.554513
ACC 1h13.21884.036710.8551230.317988
BABA 1h8.977653.962340.6511720.298483
Chitin 1h13.65053.750371.075910.304388
Epi 1h20.24963.646611.644320.30321
SA 1h19.87633.810441.353670.272057
Me-JA 1h12.65264.534670.98410.45087
Control 6h17.87318.741551.005980.490064
ABA 6h11.01294.132810.6988970.292397
ACC 6h14.26414.778530.7975330.330828
BABA 6h19.24435.127891.140950.343507
Chitin 6h21.85317.26491.323520.391173
Epi 6h21.75816.08071.239650.372932
SA 6h12.85694.419370.827530.338564
Me-JA 6h6.714243.893620.4803040.278175

Source Transcript PGSC0003DMT400089070 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG) Solyc01g057010.1 +1 1e-93 289 163/379 (43%) evidence_code:10F0H1E0IEG genomic_reference:SL2.50ch01 gene_region:50833554-50834726 transcript_region:SL2.50ch01:50833554..50834726+ functional_description:F-box family protein (AHRD V1 ***- B9GFB6_POPTR); contains Interpro domain(s) IPR017451 F-box associated type 1
TAIR PP10 AT4G12560.1 +1 2e-28 114 104/379 (27%) F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400089070

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