Probe CUST_5335_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_5335_PI426222305 | JHI_St_60k_v1 | DMT400009428 | CCTGTGGTGGAAACTGCTGTTAATAAATAATGGTTCTATTATTGGAGATACTCCATCTAT |
All Microarray Probes Designed to Gene DMG400003663
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_5046_PI426222305 | JHI_St_60k_v1 | DMT400009426 | CCATTATTTCGAATTAACTTGCTTACATATTGTTGGTTGTGTTAAGGCGGAGGAATACAA |
CUST_4924_PI426222305 | JHI_St_60k_v1 | DMT400009427 | TACTTGATGCTTATCAGCTACTTTGCCCGCTCACATATTTGAGAGTTGCAGGTGGACGAA |
CUST_5335_PI426222305 | JHI_St_60k_v1 | DMT400009428 | CCTGTGGTGGAAACTGCTGTTAATAAATAATGGTTCTATTATTGGAGATACTCCATCTAT |
Microarray Signals from CUST_5335_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 1911.03 | 138.191 | 1.1588 | 0.0856186 |
ABA 1h | 1500.3 | 147.358 | 1.02448 | 0.122458 |
ACC 1h | 1439.85 | 464.282 | 0.777169 | 0.217147 |
BABA 1h | 1544.69 | 410.784 | 0.887886 | 0.207003 |
Chitin 1h | 1653.67 | 186.983 | 1.10549 | 0.169487 |
Epi 1h | 1581.08 | 109.583 | 1.10799 | 0.0640143 |
SA 1h | 1795.79 | 714.629 | 0.917407 | 0.340101 |
Me-JA 1h | 1399.26 | 324.588 | 0.991844 | 0.141131 |
Control 6h | 2121.73 | 362.69 | 1.25572 | 0.175547 |
ABA 6h | 944.739 | 292.652 | 0.495701 | 0.122529 |
ACC 6h | 1774.37 | 281.2 | 0.916006 | 0.121122 |
BABA 6h | 2025.58 | 184.806 | 1.09406 | 0.0897181 |
Chitin 6h | 1695.26 | 245.392 | 0.951878 | 0.103699 |
Epi 6h | 2136.63 | 498.125 | 1.08131 | 0.21634 |
SA 6h | 1657.7 | 508.874 | 0.90291 | 0.244958 |
Me-JA 6h | 981.793 | 127.36 | 0.591155 | 0.0671121 |
Source Transcript PGSC0003DMT400009428 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 | AT2G17710.1 | +2 | 9e-17 | 81 | 57/117 (49%) | unknown protein; Has 39 Blast hits to 39 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:7693856-7694554 FORWARD LENGTH=152 |