Probe CUST_51369_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_51369_PI426222305 | JHI_St_60k_v1 | DMT400011206 | GAGTATGGAGACCTCATCTAGAAAGCATCTCTGAGATTGTTAGTGAATTATGATAAATTC |
All Microarray Probes Designed to Gene DMG400004388
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_51369_PI426222305 | JHI_St_60k_v1 | DMT400011206 | GAGTATGGAGACCTCATCTAGAAAGCATCTCTGAGATTGTTAGTGAATTATGATAAATTC |
Microarray Signals from CUST_51369_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 218.815 | 13.1153 | 1.19536 | 0.0715815 |
| ABA 1h | 532.497 | 90.5443 | 3.18236 | 0.445565 |
| ACC 1h | 153.984 | 30.4932 | 0.782256 | 0.118837 |
| BABA 1h | 265.016 | 37.3026 | 1.47265 | 0.0905144 |
| Chitin 1h | 219.014 | 36.5383 | 1.2961 | 0.175025 |
| Epi 1h | 175.648 | 27.6807 | 1.07854 | 0.176613 |
| SA 1h | 217.973 | 30.528 | 1.13669 | 0.133161 |
| Me-JA 1h | 87.9533 | 6.20931 | 0.588976 | 0.0416827 |
| Control 6h | 170.686 | 26.6462 | 0.906191 | 0.06677 |
| ABA 6h | 474.333 | 27.6829 | 2.43861 | 0.153142 |
| ACC 6h | 157.239 | 33.3369 | 0.719084 | 0.0462837 |
| BABA 6h | 220.175 | 13.3988 | 1.07523 | 0.0654492 |
| Chitin 6h | 192.861 | 21.0307 | 0.97964 | 0.104138 |
| Epi 6h | 176.883 | 11.0991 | 0.856848 | 0.0536132 |
| SA 6h | 211.357 | 16.0028 | 1.16198 | 0.230506 |
| Me-JA 6h | 131.633 | 23.9846 | 0.697478 | 0.0752521 |
Source Transcript PGSC0003DMT400011206 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G29195.1 | +2 | 5e-42 | 143 | 98/185 (53%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:10202673-10203254 REVERSE LENGTH=193 |