Probe CUST_4_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_4_PI426222305 | JHI_St_60k_v1 | DMT400074732 | TTTCTATGATTTCATACTGAGTTGAGCCTTTGTGCTATGTGTCCTTTTAATGTACTCCCC |
All Microarray Probes Designed to Gene DMG400029059
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_4_PI426222305 | JHI_St_60k_v1 | DMT400074732 | TTTCTATGATTTCATACTGAGTTGAGCCTTTGTGCTATGTGTCCTTTTAATGTACTCCCC |
CUST_169_PI426222305 | JHI_St_60k_v1 | DMT400074733 | TTTCTATGATTTCATACTGAGTTGAGCCTTTGTGCTATGTGTCCTTTTAATGTACTCCCC |
Microarray Signals from CUST_4_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 43.8151 | 8.26585 | 0.975177 | 0.122419 |
ABA 1h | 68.7567 | 8.97141 | 1.75731 | 0.136764 |
ACC 1h | 25.4809 | 7.81923 | 0.498125 | 0.174015 |
BABA 1h | 68.5078 | 13.4995 | 1.56658 | 0.183216 |
Chitin 1h | 32.9971 | 6.49897 | 0.809887 | 0.155037 |
Epi 1h | 37.4737 | 6.12563 | 0.97118 | 0.160695 |
SA 1h | 55.5488 | 8.90634 | 1.21113 | 0.170293 |
Me-JA 1h | 36.7614 | 9.11049 | 0.957504 | 0.233268 |
Control 6h | 49.6236 | 11.4289 | 1.06606 | 0.195712 |
ABA 6h | 117.773 | 26.6103 | 2.39388 | 0.522288 |
ACC 6h | 40.1064 | 7.82073 | 0.771418 | 0.0985324 |
BABA 6h | 48.2669 | 4.97911 | 0.986924 | 0.10215 |
Chitin 6h | 43.7726 | 14.2331 | 0.845897 | 0.27848 |
Epi 6h | 40.508 | 19.3975 | 0.668699 | 0.337043 |
SA 6h | 19.0373 | 4.13633 | 0.439138 | 0.0977945 |
Me-JA 6h | 54.6422 | 6.46861 | 1.24474 | 0.112548 |
Source Transcript PGSC0003DMT400074732 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | Solyc01g058260.2 | +1 | 0.0 | 900 | 453/500 (91%) | genomic_reference:SL2.50ch01 gene_region:58770102-58774780 transcript_region:SL2.50ch01:58770102..58774780- go_terms:GO:0005515 functional_description:Poly(A) polymerase (AHRD V1 ***- Q56XM9_ARATH); contains Interpro domain(s) IPR007012 Poly(A) polymerase, central region |
TAIR PP10 | AT3G06560.1 | +1 | 0.0 | 536 | 275/491 (56%) | poly(A) polymerase 3 | chr3:2044443-2047034 FORWARD LENGTH=507 |