Probe CUST_4924_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_4924_PI426222305 | JHI_St_60k_v1 | DMT400009427 | TACTTGATGCTTATCAGCTACTTTGCCCGCTCACATATTTGAGAGTTGCAGGTGGACGAA |
All Microarray Probes Designed to Gene DMG400003663
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_5046_PI426222305 | JHI_St_60k_v1 | DMT400009426 | CCATTATTTCGAATTAACTTGCTTACATATTGTTGGTTGTGTTAAGGCGGAGGAATACAA |
| CUST_4924_PI426222305 | JHI_St_60k_v1 | DMT400009427 | TACTTGATGCTTATCAGCTACTTTGCCCGCTCACATATTTGAGAGTTGCAGGTGGACGAA |
| CUST_5335_PI426222305 | JHI_St_60k_v1 | DMT400009428 | CCTGTGGTGGAAACTGCTGTTAATAAATAATGGTTCTATTATTGGAGATACTCCATCTAT |
Microarray Signals from CUST_4924_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 33.1057 | 3.65482 | 1.28532 | 0.143644 |
| ABA 1h | 18.4319 | 3.2626 | 0.79533 | 0.147775 |
| ACC 1h | 22.2397 | 6.37822 | 0.787032 | 0.206527 |
| BABA 1h | 34.5204 | 15.4389 | 1.05279 | 0.616885 |
| Chitin 1h | 30.3933 | 8.10693 | 1.23941 | 0.438123 |
| Epi 1h | 27.9817 | 3.51854 | 1.24781 | 0.1617 |
| SA 1h | 25.479 | 3.4302 | 0.968771 | 0.130803 |
| Me-JA 1h | 8.9099 | 3.69501 | 0.36557 | 0.172035 |
| Control 6h | 38.2351 | 11.2952 | 1.3793 | 0.347398 |
| ABA 6h | 12.4166 | 3.4007 | 0.422431 | 0.138702 |
| ACC 6h | 30.0969 | 4.52864 | 1.00565 | 0.23053 |
| BABA 6h | 33.1788 | 4.73441 | 1.13507 | 0.143396 |
| Chitin 6h | 24.0256 | 6.33469 | 0.821129 | 0.224646 |
| Epi 6h | 37.626 | 12.8441 | 1.12722 | 0.43833 |
| SA 6h | 21.2748 | 5.82447 | 0.776245 | 0.269258 |
| Me-JA 6h | 14.6048 | 4.7123 | 0.490168 | 0.194 |
Source Transcript PGSC0003DMT400009427 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT2G17710.1 | +2 | 3e-11 | 64 | 57/149 (38%) | unknown protein; Has 39 Blast hits to 39 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:7693856-7694554 FORWARD LENGTH=152 |