Probe CUST_48903_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_48903_PI426222305 | JHI_St_60k_v1 | DMT400056336 | CATTTACAGAATACATTTGGGTTGTTTGGTGGCTGGATAAGAAACATCCGATCATATATA |
All Microarray Probes Designed to Gene DMG400021886
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_48903_PI426222305 | JHI_St_60k_v1 | DMT400056336 | CATTTACAGAATACATTTGGGTTGTTTGGTGGCTGGATAAGAAACATCCGATCATATATA |
Microarray Signals from CUST_48903_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 596.074 | 39.5613 | 2.11657 | 0.122733 |
ABA 1h | 381.398 | 37.3027 | 1.52226 | 0.0887581 |
ACC 1h | 375.113 | 149.421 | 1.03443 | 0.55007 |
BABA 1h | 373.306 | 85.0754 | 1.29982 | 0.20456 |
Chitin 1h | 234.451 | 38.5606 | 0.906706 | 0.0803393 |
Epi 1h | 322.176 | 61.5364 | 1.28146 | 0.246614 |
SA 1h | 395.215 | 48.0358 | 1.34981 | 0.11846 |
Me-JA 1h | 182.991 | 34.2992 | 0.773838 | 0.0904372 |
Control 6h | 229.952 | 61.7094 | 0.743563 | 0.184691 |
ABA 6h | 221.872 | 18.0776 | 0.739332 | 0.0442109 |
ACC 6h | 253.63 | 15.2213 | 0.786114 | 0.0926927 |
BABA 6h | 326.945 | 30.772 | 1.03164 | 0.0625417 |
Chitin 6h | 297.995 | 17.6058 | 0.997077 | 0.0588532 |
Epi 6h | 298.021 | 24.6406 | 0.93633 | 0.0857401 |
SA 6h | 225.113 | 65.221 | 0.73184 | 0.172273 |
Me-JA 6h | 313.096 | 90.5584 | 1.03929 | 0.212698 |
Source Transcript PGSC0003DMT400056336 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 | AT5G48050.1 | +2 | 6e-08 | 53 | 37/116 (32%) | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19472661-19473770 REVERSE LENGTH=369 |