Probe CUST_48875_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_48875_PI426222305 | JHI_St_60k_v1 | DMT400043275 | GAGAGCAAATCGACGCTTGAAAAAGTTCTTTGAGATTCTCAATTTAGGACTAAAGAGTTA |
All Microarray Probes Designed to Gene DMG400016799
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_48861_PI426222305 | JHI_St_60k_v1 | DMT400043277 | GAGAGCAAATCGACGCTTGAAAAAGTTCTTTGAGATTCTCAATTTAGGACTAAAGAGTTA |
| CUST_48875_PI426222305 | JHI_St_60k_v1 | DMT400043275 | GAGAGCAAATCGACGCTTGAAAAAGTTCTTTGAGATTCTCAATTTAGGACTAAAGAGTTA |
| CUST_48872_PI426222305 | JHI_St_60k_v1 | DMT400043274 | AGGTACTCGAATTACAAGCCACTTGGATGGAAATGCAGATGTGGGGGTCACTTCTACAAT |
Microarray Signals from CUST_48875_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 1214.03 | 128.455 | 3.6855 | 0.213093 |
| ABA 1h | 779.47 | 45.2237 | 2.69917 | 0.156316 |
| ACC 1h | 917.844 | 138.239 | 2.67866 | 0.222278 |
| BABA 1h | 814.143 | 121.334 | 2.52879 | 0.154752 |
| Chitin 1h | 839.805 | 77.0716 | 2.8423 | 0.251217 |
| Epi 1h | 750.451 | 45.1365 | 2.65112 | 0.15361 |
| SA 1h | 834.921 | 94.9085 | 2.46026 | 0.423134 |
| Me-JA 1h | 320.313 | 18.8929 | 1.20349 | 0.129591 |
| Control 6h | 282.599 | 68.7515 | 0.801372 | 0.163712 |
| ABA 6h | 63.2686 | 12.5195 | 0.17514 | 0.0426272 |
| ACC 6h | 209.986 | 57.3888 | 0.51657 | 0.100725 |
| BABA 6h | 227.653 | 39.0568 | 0.606618 | 0.0920413 |
| Chitin 6h | 285.41 | 30.4308 | 0.813587 | 0.0794962 |
| Epi 6h | 185.934 | 45.3273 | 0.47643 | 0.167057 |
| SA 6h | 128.886 | 23.5108 | 0.384862 | 0.0332714 |
| Me-JA 6h | 121.513 | 30.8322 | 0.351385 | 0.0605766 |
Source Transcript PGSC0003DMT400043275 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G10310.1 | +3 | 5e-26 | 100 | 48/94 (51%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:3241666-3242127 REVERSE LENGTH=122 |