Probe CUST_48872_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_48872_PI426222305 | JHI_St_60k_v1 | DMT400043274 | AGGTACTCGAATTACAAGCCACTTGGATGGAAATGCAGATGTGGGGGTCACTTCTACAAT |
All Microarray Probes Designed to Gene DMG400016799
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_48861_PI426222305 | JHI_St_60k_v1 | DMT400043277 | GAGAGCAAATCGACGCTTGAAAAAGTTCTTTGAGATTCTCAATTTAGGACTAAAGAGTTA |
| CUST_48875_PI426222305 | JHI_St_60k_v1 | DMT400043275 | GAGAGCAAATCGACGCTTGAAAAAGTTCTTTGAGATTCTCAATTTAGGACTAAAGAGTTA |
| CUST_48872_PI426222305 | JHI_St_60k_v1 | DMT400043274 | AGGTACTCGAATTACAAGCCACTTGGATGGAAATGCAGATGTGGGGGTCACTTCTACAAT |
Microarray Signals from CUST_48872_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 3887.53 | 492.836 | 3.97251 | 0.247232 |
| ABA 1h | 2519.8 | 213.274 | 2.93866 | 0.169712 |
| ACC 1h | 3308.99 | 586.549 | 3.24432 | 0.364372 |
| BABA 1h | 2861.27 | 363.497 | 3.02849 | 0.1749 |
| Chitin 1h | 2939.77 | 360.391 | 3.34219 | 0.323906 |
| Epi 1h | 2548.82 | 182.93 | 3.04313 | 0.175747 |
| SA 1h | 2819.05 | 330.149 | 2.81369 | 0.335188 |
| Me-JA 1h | 979.351 | 56.6705 | 1.24591 | 0.122009 |
| Control 6h | 720.336 | 174.138 | 0.695551 | 0.137117 |
| ABA 6h | 192.654 | 41.4784 | 0.179638 | 0.046764 |
| ACC 6h | 552.076 | 110.872 | 0.479562 | 0.045424 |
| BABA 6h | 594.57 | 114.06 | 0.533387 | 0.0968057 |
| Chitin 6h | 679.777 | 84.2628 | 0.652117 | 0.072201 |
| Epi 6h | 574.795 | 64.8066 | 0.522401 | 0.103125 |
| SA 6h | 359.061 | 43.2223 | 0.371055 | 0.0218638 |
| Me-JA 6h | 275.014 | 76.9591 | 0.263335 | 0.0582163 |
Source Transcript PGSC0003DMT400043274 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G10310.1 | +1 | 8e-28 | 100 | 47/89 (53%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:3241666-3242127 REVERSE LENGTH=122 |