Probe CUST_48861_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_48861_PI426222305 | JHI_St_60k_v1 | DMT400043277 | GAGAGCAAATCGACGCTTGAAAAAGTTCTTTGAGATTCTCAATTTAGGACTAAAGAGTTA |
All Microarray Probes Designed to Gene DMG400016799
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_48861_PI426222305 | JHI_St_60k_v1 | DMT400043277 | GAGAGCAAATCGACGCTTGAAAAAGTTCTTTGAGATTCTCAATTTAGGACTAAAGAGTTA |
| CUST_48875_PI426222305 | JHI_St_60k_v1 | DMT400043275 | GAGAGCAAATCGACGCTTGAAAAAGTTCTTTGAGATTCTCAATTTAGGACTAAAGAGTTA |
| CUST_48872_PI426222305 | JHI_St_60k_v1 | DMT400043274 | AGGTACTCGAATTACAAGCCACTTGGATGGAAATGCAGATGTGGGGGTCACTTCTACAAT |
Microarray Signals from CUST_48861_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 1206.68 | 176.425 | 3.56123 | 0.275802 |
| ABA 1h | 753.536 | 51.981 | 2.55465 | 0.236572 |
| ACC 1h | 1011.44 | 131.643 | 2.9145 | 0.176514 |
| BABA 1h | 834.07 | 124.951 | 2.54585 | 0.181637 |
| Chitin 1h | 763.691 | 57.7889 | 2.54323 | 0.147204 |
| Epi 1h | 789.816 | 84.8442 | 2.71581 | 0.250902 |
| SA 1h | 848.666 | 59.4195 | 2.47614 | 0.320446 |
| Me-JA 1h | 316.54 | 18.5886 | 1.16656 | 0.11117 |
| Control 6h | 265.158 | 68.031 | 0.730489 | 0.167536 |
| ABA 6h | 60.951 | 10.3267 | 0.168178 | 0.0356741 |
| ACC 6h | 193.505 | 34.8561 | 0.491494 | 0.0391904 |
| BABA 6h | 222.563 | 32.5908 | 0.586357 | 0.0963946 |
| Chitin 6h | 263.511 | 29.938 | 0.735296 | 0.0720324 |
| Epi 6h | 198.154 | 33.6483 | 0.513407 | 0.136682 |
| SA 6h | 129.959 | 29.0088 | 0.372232 | 0.053271 |
| Me-JA 6h | 122.434 | 29.8467 | 0.348062 | 0.0594284 |
Source Transcript PGSC0003DMT400043277 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G10310.1 | +1 | 9e-09 | 51 | 27/62 (44%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:3241666-3242127 REVERSE LENGTH=122 |