Probe CUST_48331_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_48331_PI426222305 JHI_St_60k_v1 DMT400043193 GATTCTATGATACAACTCAAAAAATGTATGGTCCAAATACTTGAACCCAACTCATTTCCG

All Microarray Probes Designed to Gene DMG400016765

Probe IDChip nameTranscript IDProbe Sequence
CUST_48331_PI426222305 JHI_St_60k_v1 DMT400043193 GATTCTATGATACAACTCAAAAAATGTATGGTCCAAATACTTGAACCCAACTCATTTCCG


Microarray Signals from CUST_48331_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h6.300173.135741.055420.537974
ABA 1h5.505542.961621.054250.570629
ACC 1h6.802753.528351.11470.586192
BABA 1h8.343153.334751.360310.636145
Chitin 1h6.527733.111021.212220.605443
Epi 1h5.268893.062681.047450.598394
SA 1h5.322463.088450.8796890.51028
Me-JA 1h7.220753.17051.433250.697223
Control 6h6.745113.218161.126050.557853
ABA 6h62.010213.26469.385231.8411
ACC 6h6.446843.827590.9321350.539776
BABA 6h7.683043.537641.138350.553568
Chitin 6h6.043683.506470.9637060.558815
Epi 6h6.259923.667830.9332560.540914
SA 6h5.769393.346670.9905880.574573
Me-JA 6h9.056273.366351.363480.661634

Source Transcript PGSC0003DMT400043193 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G31940.1 +2 1e-43 148 84/147 (57%) unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:11470293-11471154 REVERSE LENGTH=158

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043193

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