Probe CUST_47486_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_47486_PI426222305 | JHI_St_60k_v1 | DMT400064780 | TGGATGGTAGGCATTCCCAAATGTCCTATATGTATATTGTAACACAAATGCATGTTGATT |
All Microarray Probes Designed to Gene DMG400025163
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_47486_PI426222305 | JHI_St_60k_v1 | DMT400064780 | TGGATGGTAGGCATTCCCAAATGTCCTATATGTATATTGTAACACAAATGCATGTTGATT |
Microarray Signals from CUST_47486_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 452.522 | 52.2259 | 0.966492 | 0.0713459 |
ABA 1h | 334.19 | 36.0869 | 0.808554 | 0.0645931 |
ACC 1h | 561.715 | 231.235 | 0.854654 | 0.662149 |
BABA 1h | 473.917 | 49.7303 | 1.05453 | 0.11909 |
Chitin 1h | 319.233 | 89.1799 | 0.710033 | 0.188773 |
Epi 1h | 409.125 | 47.9066 | 1.01128 | 0.123233 |
SA 1h | 720.307 | 173.912 | 1.43301 | 0.325992 |
Me-JA 1h | 237.433 | 17.958 | 0.626625 | 0.0582261 |
Control 6h | 435.328 | 103.142 | 0.877548 | 0.164026 |
ABA 6h | 653.731 | 37.993 | 1.33035 | 0.0771819 |
ACC 6h | 888.421 | 79.7652 | 1.66397 | 0.219771 |
BABA 6h | 933.028 | 110.838 | 1.78214 | 0.178942 |
Chitin 6h | 572.911 | 89.7131 | 1.13556 | 0.232541 |
Epi 6h | 495.252 | 34.165 | 0.947472 | 0.0552439 |
SA 6h | 289.192 | 51.3463 | 0.610733 | 0.0501121 |
Me-JA 6h | 632.12 | 280.152 | 1.14737 | 0.452269 |
Source Transcript PGSC0003DMT400064780 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 | AT4G37240.1 | +2 | 7e-18 | 80 | 43/111 (39%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:17524546-17525052 FORWARD LENGTH=168 |