Probe CUST_45344_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_45344_PI426222305 | JHI_St_60k_v1 | DMT400001605 | GCCTTCCAAAAACAAACTAGTTGTTAACATTGGTGATGTCATTCAGGTATTTATAACTCC |
All Microarray Probes Designed to Gene DMG404000594
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_45357_PI426222305 | JHI_St_60k_v1 | DMT400001608 | GAAAAACTATCGGTACCTTCTGATACTTATTTCAAAAGCACAAAGAAATCAGCTGGGACT |
| CUST_45366_PI426222305 | JHI_St_60k_v1 | DMT400001603 | CAAGCCTGATTCTTTGAAGAGGAATCCTCAATGCACTGTTTGTTGTTACTGATTTAAAAT |
| CUST_45377_PI426222305 | JHI_St_60k_v1 | DMT400001604 | ACATTGGTGATGTCATTCAGGTGCTAAGCAACAATAAATTCAAGAGTGCAACTCACAAAG |
| CUST_45344_PI426222305 | JHI_St_60k_v1 | DMT400001605 | GCCTTCCAAAAACAAACTAGTTGTTAACATTGGTGATGTCATTCAGGTATTTATAACTCC |
| CUST_45365_PI426222305 | JHI_St_60k_v1 | DMT400001607 | CGCCTTCCAAACACAAACTAATTGTTAACATTGGTGATGTCATTCAGGTGCTAAGCAACA |
Microarray Signals from CUST_45344_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 618.343 | 182.432 | 1.98802 | 0.43931 |
| ABA 1h | 654.263 | 132.104 | 2.45203 | 0.610467 |
| ACC 1h | 1308.63 | 367.1 | 4.01219 | 1.75755 |
| BABA 1h | 429.092 | 55.7294 | 1.52649 | 0.2158 |
| Chitin 1h | 581.064 | 161.839 | 2.09845 | 0.618548 |
| Epi 1h | 466.558 | 105.964 | 1.7832 | 0.383391 |
| SA 1h | 534.961 | 82.5268 | 1.7733 | 0.360516 |
| Me-JA 1h | 442.676 | 37.9419 | 1.87532 | 0.292445 |
| Control 6h | 148.102 | 65.2442 | 0.367911 | 0.269489 |
| ABA 6h | 160.35 | 39.271 | 0.495172 | 0.145285 |
| ACC 6h | 56.4677 | 16.4225 | 0.158899 | 0.0212175 |
| BABA 6h | 68.6413 | 5.42833 | 0.212286 | 0.0166988 |
| Chitin 6h | 78.0714 | 12.298 | 0.248584 | 0.0379091 |
| Epi 6h | 104.233 | 33.5167 | 0.276067 | 0.163908 |
| SA 6h | 60.4205 | 9.77224 | 0.206837 | 0.0503951 |
| Me-JA 6h | 35.7238 | 17.924 | 0.0982327 | 0.0447163 |
Source Transcript PGSC0003DMT400001605 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT4G10490.1 | +1 | 2e-31 | 123 | 89/300 (30%) | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:6483900-6485179 FORWARD LENGTH=348 |