Probe CUST_42865_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_42865_PI426222305 JHI_St_60k_v1 DMT400051532 GTTAAGACTGCCAGGCAGAAAGCTTCCCTATTTGCACTTCACATATTTATCTACTCACAG

All Microarray Probes Designed to Gene DMG400020018

Probe IDChip nameTranscript IDProbe Sequence
CUST_42865_PI426222305 JHI_St_60k_v1 DMT400051532 GTTAAGACTGCCAGGCAGAAAGCTTCCCTATTTGCACTTCACATATTTATCTACTCACAG


Microarray Signals from CUST_42865_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h16.15953.077522.055270.396922
ABA 1h9.042753.119851.247370.461851
ACC 1h5.504323.196870.6861490.3981
BABA 1h8.009963.153820.9702890.460999
Chitin 1h5.230642.993110.76610.423495
Epi 1h16.9056.858742.00031.35623
SA 1h7.418712.997680.8503450.407444
Me-JA 1h7.876183.075961.203590.50848
Control 6h10.20113.905831.13620.616425
ABA 6h13.68515.052861.416430.763855
ACC 6h19.4955.016281.999991.04471
BABA 6h37.7229.81342.062163.02685
Chitin 6h6.707283.430170.8048840.414595
Epi 6h12.88563.838671.292340.468305
SA 6h14.25517.480371.422050.712054
Me-JA 6h22.567614.68921.900311.37511

Source Transcript PGSC0003DMT400051532 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT2G40070.1 -2 6e-18 84 37/50 (74%) BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:16728378-16731160 REVERSE LENGTH=607

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400051532

Click here to view details at Spud DB Genome Browser (opens in new window)