Probe CUST_39962_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_39962_PI426222305 JHI_St_60k_v1 DMT400081474 GCTTATGCTAATCATTTTCTTGAAGGATCGTTTGGTAGAGTGCATTAGAAAAGATAATGC

All Microarray Probes Designed to Gene DMG400031868

Probe IDChip nameTranscript IDProbe Sequence
CUST_39961_PI426222305 JHI_St_60k_v1 DMT400081473 GCTTATGCTAATCATTTTCTTGAAGGATCGTTTGGTAGAGTGCATTAGAAAAGATAATGC
CUST_39962_PI426222305 JHI_St_60k_v1 DMT400081474 GCTTATGCTAATCATTTTCTTGAAGGATCGTTTGGTAGAGTGCATTAGAAAAGATAATGC


Microarray Signals from CUST_39962_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h356.34562.41811.347510.157109
ABA 1h154.9889.522170.6838550.0420103
ACC 1h204.40643.8630.7378710.118101
BABA 1h201.33440.08980.779650.0950102
Chitin 1h173.76219.37960.7458240.0454598
Epi 1h182.38917.97020.8143640.0708813
SA 1h136.82518.9870.5105520.055313
Me-JA 1h31.22817.804380.137780.0322415
Control 6h557.482102.7472.103020.296709
ABA 6h249.99317.72730.9134690.0699603
ACC 6h510.77655.98691.716030.182476
BABA 6h541.87885.2421.845860.254999
Chitin 6h661.93487.39832.38870.231705
Epi 6h560.22750.63941.924030.130098
SA 6h454.73780.06631.731330.135413
Me-JA 6h354.81104.9191.263330.306781

Source Transcript PGSC0003DMT400081474 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT5G12900.1 +3 7e-158 471 299/600 (50%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4072151-4074445 REVERSE LENGTH=562

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400081474

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