Probe CUST_39962_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_39962_PI426222305 | JHI_St_60k_v1 | DMT400081474 | GCTTATGCTAATCATTTTCTTGAAGGATCGTTTGGTAGAGTGCATTAGAAAAGATAATGC |
All Microarray Probes Designed to Gene DMG400031868
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_39961_PI426222305 | JHI_St_60k_v1 | DMT400081473 | GCTTATGCTAATCATTTTCTTGAAGGATCGTTTGGTAGAGTGCATTAGAAAAGATAATGC |
CUST_39962_PI426222305 | JHI_St_60k_v1 | DMT400081474 | GCTTATGCTAATCATTTTCTTGAAGGATCGTTTGGTAGAGTGCATTAGAAAAGATAATGC |
Microarray Signals from CUST_39962_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 356.345 | 62.4181 | 1.34751 | 0.157109 |
ABA 1h | 154.988 | 9.52217 | 0.683855 | 0.0420103 |
ACC 1h | 204.406 | 43.863 | 0.737871 | 0.118101 |
BABA 1h | 201.334 | 40.0898 | 0.77965 | 0.0950102 |
Chitin 1h | 173.762 | 19.3796 | 0.745824 | 0.0454598 |
Epi 1h | 182.389 | 17.9702 | 0.814364 | 0.0708813 |
SA 1h | 136.825 | 18.987 | 0.510552 | 0.055313 |
Me-JA 1h | 31.2281 | 7.80438 | 0.13778 | 0.0322415 |
Control 6h | 557.482 | 102.747 | 2.10302 | 0.296709 |
ABA 6h | 249.993 | 17.7273 | 0.913469 | 0.0699603 |
ACC 6h | 510.776 | 55.9869 | 1.71603 | 0.182476 |
BABA 6h | 541.878 | 85.242 | 1.84586 | 0.254999 |
Chitin 6h | 661.934 | 87.3983 | 2.3887 | 0.231705 |
Epi 6h | 560.227 | 50.6394 | 1.92403 | 0.130098 |
SA 6h | 454.737 | 80.0663 | 1.73133 | 0.135413 |
Me-JA 6h | 354.81 | 104.919 | 1.26333 | 0.306781 |
Source Transcript PGSC0003DMT400081474 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 | AT5G12900.1 | +3 | 7e-158 | 471 | 299/600 (50%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4072151-4074445 REVERSE LENGTH=562 |