Probe CUST_39146_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_39146_PI426222305 | JHI_St_60k_v1 | DMT400035598 | ATTTGTGGCTTGTGAGGAATACAAGATTGTAGGTGCTTTCTTAATGTTACATTCTCCAAA |
All Microarray Probes Designed to Gene DMG400013688
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_39146_PI426222305 | JHI_St_60k_v1 | DMT400035598 | ATTTGTGGCTTGTGAGGAATACAAGATTGTAGGTGCTTTCTTAATGTTACATTCTCCAAA |
| CUST_39167_PI426222305 | JHI_St_60k_v1 | DMT400035597 | ATATGTGGTGACTCATTGTGGGGAATTCCAGCATCTGTTCTTGCTCTAGATTTTGCATGA |
| CUST_39150_PI426222305 | JHI_St_60k_v1 | DMT400035599 | CCAGCATCTGTTCTTGCTCTAGATTTTGCATGAAATTTTAGTCACATAATAGTTGTACAG |
Microarray Signals from CUST_39146_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 4565.17 | 336.492 | 0.985266 | 0.0568886 |
| ABA 1h | 3867.14 | 223.484 | 0.947629 | 0.0686664 |
| ACC 1h | 4365.24 | 803.526 | 0.885893 | 0.117425 |
| BABA 1h | 3810.03 | 369.745 | 0.849325 | 0.0490419 |
| Chitin 1h | 3825.61 | 331.658 | 0.91612 | 0.0784066 |
| Epi 1h | 3511.75 | 204.251 | 0.877182 | 0.0506504 |
| SA 1h | 4411.46 | 307.345 | 0.927227 | 0.064644 |
| Me-JA 1h | 3358.63 | 234.993 | 0.888339 | 0.0886963 |
| Control 6h | 5252.99 | 1020.64 | 1.08642 | 0.140366 |
| ABA 6h | 5372.49 | 352.068 | 1.09177 | 0.0630377 |
| ACC 6h | 5895.39 | 624.868 | 1.10317 | 0.0636957 |
| BABA 6h | 6032.79 | 348.342 | 1.16918 | 0.0675067 |
| Chitin 6h | 5007.86 | 289.549 | 1.01925 | 0.0588516 |
| Epi 6h | 5416.33 | 313.109 | 1.04093 | 0.0601027 |
| SA 6h | 4213.41 | 1074.48 | 0.849212 | 0.166121 |
| Me-JA 6h | 4963.27 | 866.817 | 1.05047 | 0.0976536 |
Source Transcript PGSC0003DMT400035598 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT2G31490.1 | +3 | 1e-33 | 119 | 51/71 (72%) | unknown protein; Has 55 Blast hits to 55 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:13412060-13413002 FORWARD LENGTH=71 |