Probe CUST_34861_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_34861_PI426222305 JHI_St_60k_v1 DMT400073080 GGGTTTTGGAATCCCAAATGAGATATTCTATCGAAGTTCTAATTTGGATTCAGTTGAATG

All Microarray Probes Designed to Gene DMG400028424

Probe IDChip nameTranscript IDProbe Sequence
CUST_34861_PI426222305 JHI_St_60k_v1 DMT400073080 GGGTTTTGGAATCCCAAATGAGATATTCTATCGAAGTTCTAATTTGGATTCAGTTGAATG


Microarray Signals from CUST_34861_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h97.173112.91991.754390.123476
ABA 1h114.51215.14312.334510.434852
ACC 1h58.134221.20330.909370.3043
BABA 1h57.32749.350411.059120.0956735
Chitin 1h53.37834.66631.086570.0948365
Epi 1h42.06685.454460.8773810.132702
SA 1h58.26256.284781.029170.149466
Me-JA 1h66.61247.757941.475550.118658
Control 6h40.23110.37720.6742270.156416
ABA 6h111.41915.48621.884030.226928
ACC 6h44.27194.965970.7073580.0979013
BABA 6h49.64184.996390.8078390.0823478
Chitin 6h52.6755.067670.9055980.0878675
Epi 6h35.13944.793530.5705870.077579
SA 6h32.0734.336470.588320.0813713
Me-JA 6h65.15695.123981.199360.145133

Source Transcript PGSC0003DMT400073080 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT2G42760.1 +3 1e-19 87 52/108 (48%) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). | chr2:17796382-17797185 REVERSE LENGTH=267

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400073080

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