Probe CUST_34257_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_34257_PI426222305 | JHI_St_60k_v1 | DMT400044890 | CCTTTTGTACGTGTTATCGATTGGTTATTGATTTGTAACGATTTGGTTATCGGTTTAACC |
All Microarray Probes Designed to Gene DMG400017415
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_34257_PI426222305 | JHI_St_60k_v1 | DMT400044890 | CCTTTTGTACGTGTTATCGATTGGTTATTGATTTGTAACGATTTGGTTATCGGTTTAACC |
CUST_34234_PI426222305 | JHI_St_60k_v1 | DMT400044889 | TATAGATGTCAAAGATATTGAGGAATGTATTGTCAAGGGGGACTGTAAGAAGTTAGCTGA |
CUST_34267_PI426222305 | JHI_St_60k_v1 | DMT400044892 | CCTTTTGTACGTGTTATCGATTGGTTATTGATTTGTAACGATTTGGTTATCGGTTTAACC |
Microarray Signals from CUST_34257_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 5.07431 | 2.94153 | 0.921876 | 0.525325 |
ABA 1h | 65.5693 | 9.76942 | 12.9571 | 2.73882 |
ACC 1h | 8.0569 | 3.49088 | 1.32731 | 0.639691 |
BABA 1h | 5.39622 | 3.13441 | 1.00001 | 0.580062 |
Chitin 1h | 5.03784 | 2.93146 | 1.0368 | 0.578628 |
Epi 1h | 5.00365 | 2.90672 | 1.06195 | 0.599099 |
SA 1h | 6.90072 | 3.00882 | 1.14027 | 0.55617 |
Me-JA 1h | 5.21627 | 3.03137 | 1.15405 | 0.659577 |
Control 6h | 5.19877 | 3.01721 | 0.927743 | 0.538341 |
ABA 6h | 46.703 | 13.3986 | 7.22799 | 1.76725 |
ACC 6h | 6.20351 | 3.67525 | 0.946636 | 0.548169 |
BABA 6h | 5.86849 | 3.40815 | 0.936172 | 0.542745 |
Chitin 6h | 5.82276 | 3.37239 | 0.978398 | 0.56658 |
Epi 6h | 6.27207 | 3.55307 | 0.989186 | 0.555354 |
SA 6h | 5.85032 | 3.24275 | 1.05752 | 0.587006 |
Me-JA 6h | 5.22696 | 3.02985 | 0.938766 | 0.543578 |
Source Transcript PGSC0003DMT400044890 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 | AT4G12680.1 | +2 | 2e-112 | 357 | 185/295 (63%) | unknown protein; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40640.1); Has 103 Blast hits to 103 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:7475104-7478174 FORWARD LENGTH=575 |