Probe CUST_34257_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_34257_PI426222305 JHI_St_60k_v1 DMT400044890 CCTTTTGTACGTGTTATCGATTGGTTATTGATTTGTAACGATTTGGTTATCGGTTTAACC

All Microarray Probes Designed to Gene DMG400017415

Probe IDChip nameTranscript IDProbe Sequence
CUST_34257_PI426222305 JHI_St_60k_v1 DMT400044890 CCTTTTGTACGTGTTATCGATTGGTTATTGATTTGTAACGATTTGGTTATCGGTTTAACC
CUST_34234_PI426222305 JHI_St_60k_v1 DMT400044889 TATAGATGTCAAAGATATTGAGGAATGTATTGTCAAGGGGGACTGTAAGAAGTTAGCTGA
CUST_34267_PI426222305 JHI_St_60k_v1 DMT400044892 CCTTTTGTACGTGTTATCGATTGGTTATTGATTTGTAACGATTTGGTTATCGGTTTAACC


Microarray Signals from CUST_34257_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h5.074312.941530.9218760.525325
ABA 1h65.56939.7694212.95712.73882
ACC 1h8.05693.490881.327310.639691
BABA 1h5.396223.134411.000010.580062
Chitin 1h5.037842.931461.03680.578628
Epi 1h5.003652.906721.061950.599099
SA 1h6.900723.008821.140270.55617
Me-JA 1h5.216273.031371.154050.659577
Control 6h5.198773.017210.9277430.538341
ABA 6h46.70313.39867.227991.76725
ACC 6h6.203513.675250.9466360.548169
BABA 6h5.868493.408150.9361720.542745
Chitin 6h5.822763.372390.9783980.56658
Epi 6h6.272073.553070.9891860.555354
SA 6h5.850323.242751.057520.587006
Me-JA 6h5.226963.029850.9387660.543578

Source Transcript PGSC0003DMT400044890 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT4G12680.1 +2 2e-112 357 185/295 (63%) unknown protein; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40640.1); Has 103 Blast hits to 103 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:7475104-7478174 FORWARD LENGTH=575

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044890

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