Probe CUST_28816_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_28816_PI426222305 JHI_St_60k_v1 DMT400083090 GAATTTTCTAGAGTTAGAGGTTGGGATCAGTATCACAGTCCTAGAAACCTTCTCCTAGCT

All Microarray Probes Designed to Gene DMG400033050

Probe IDChip nameTranscript IDProbe Sequence
CUST_28816_PI426222305 JHI_St_60k_v1 DMT400083090 GAATTTTCTAGAGTTAGAGGTTGGGATCAGTATCACAGTCCTAGAAACCTTCTCCTAGCT


Microarray Signals from CUST_28816_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h104.09920.15151.297710.167796
ABA 1h70.626810.04341.007540.0900809
ACC 1h68.584426.01630.7073090.328245
BABA 1h92.894519.15581.187290.151175
Chitin 1h64.84015.340910.9255080.104224
Epi 1h68.58545.402841.020520.0807797
SA 1h93.24976.548571.166670.134879
Me-JA 1h85.923412.87461.329780.0962335
Control 6h87.328628.14531.010540.280718
ABA 6h20.61044.066190.2483010.0505939
ACC 6h120.81227.62511.283890.178083
BABA 6h137.86744.98111.433290.426358
Chitin 6h105.13236.77551.141250.356243
Epi 6h56.729411.47830.6242940.103755
SA 6h52.07721.20820.4864830.346185
Me-JA 6h109.06846.42541.193620.567072

Source Transcript PGSC0003DMT400083090 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT3G25400.1 +2 5e-38 131 74/107 (69%) CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). | chr3:9213236-9214144 FORWARD LENGTH=141

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400083090

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