Probe CUST_28816_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_28816_PI426222305 | JHI_St_60k_v1 | DMT400083090 | GAATTTTCTAGAGTTAGAGGTTGGGATCAGTATCACAGTCCTAGAAACCTTCTCCTAGCT |
All Microarray Probes Designed to Gene DMG400033050
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_28816_PI426222305 | JHI_St_60k_v1 | DMT400083090 | GAATTTTCTAGAGTTAGAGGTTGGGATCAGTATCACAGTCCTAGAAACCTTCTCCTAGCT |
Microarray Signals from CUST_28816_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 104.099 | 20.1515 | 1.29771 | 0.167796 |
ABA 1h | 70.6268 | 10.0434 | 1.00754 | 0.0900809 |
ACC 1h | 68.5844 | 26.0163 | 0.707309 | 0.328245 |
BABA 1h | 92.8945 | 19.1558 | 1.18729 | 0.151175 |
Chitin 1h | 64.8401 | 5.34091 | 0.925508 | 0.104224 |
Epi 1h | 68.5854 | 5.40284 | 1.02052 | 0.0807797 |
SA 1h | 93.2497 | 6.54857 | 1.16667 | 0.134879 |
Me-JA 1h | 85.9234 | 12.8746 | 1.32978 | 0.0962335 |
Control 6h | 87.3286 | 28.1453 | 1.01054 | 0.280718 |
ABA 6h | 20.6104 | 4.06619 | 0.248301 | 0.0505939 |
ACC 6h | 120.812 | 27.6251 | 1.28389 | 0.178083 |
BABA 6h | 137.867 | 44.9811 | 1.43329 | 0.426358 |
Chitin 6h | 105.132 | 36.7755 | 1.14125 | 0.356243 |
Epi 6h | 56.7294 | 11.4783 | 0.624294 | 0.103755 |
SA 6h | 52.077 | 21.2082 | 0.486483 | 0.346185 |
Me-JA 6h | 109.068 | 46.4254 | 1.19362 | 0.567072 |
Source Transcript PGSC0003DMT400083090 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 | AT3G25400.1 | +2 | 5e-38 | 131 | 74/107 (69%) | CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). | chr3:9213236-9214144 FORWARD LENGTH=141 |