Probe CUST_27112_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_27112_PI426222305 JHI_St_60k_v1 DMT400040864 CTTCCTAAGGCCTTTAAGATATACTACTGTGGCCGCAACTTAAAAGATTGATTAATGTAT

All Microarray Probes Designed to Gene DMG400015799

Probe IDChip nameTranscript IDProbe Sequence
CUST_27112_PI426222305 JHI_St_60k_v1 DMT400040864 CTTCCTAAGGCCTTTAAGATATACTACTGTGGCCGCAACTTAAAAGATTGATTAATGTAT


Microarray Signals from CUST_27112_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h742.4457.11761.182920.0685524
ABA 1h2044.54338.1263.588810.471253
ACC 1h438.24983.41060.655550.0923263
BABA 1h629.263196.2850.9129680.286763
Chitin 1h437.82225.58310.7789970.0482864
Epi 1h519.86660.94020.9486170.099797
SA 1h531.939112.440.7907560.172284
Me-JA 1h291.65542.68880.5613390.0439092
Control 6h840.465154.1271.297410.160241
ABA 6h1312.64165.4471.946940.144575
ACC 6h754.562113.2281.027870.118089
BABA 6h681.01884.69850.9596780.0979305
Chitin 6h635.82270.65890.946230.0803399
Epi 6h775.3649.18391.097750.0637338
SA 6h776.636203.5711.15130.234536
Me-JA 6h370.493107.060.5302520.164932

Source Transcript PGSC0003DMT400040864 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT5G52420.1 +1 2e-67 216 100/192 (52%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:21281817-21282545 FORWARD LENGTH=242

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400040864

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