Probe CUST_249_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_249_PI426222305 | JHI_St_60k_v1 | DMT400024237 | GTTGCAATAATATGCCTCTGCTGTTTATTGGTGATGTTTTTCTTCCCTGCTTCCTCTCTA |
All Microarray Probes Designed to Gene DMG400009360
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_249_PI426222305 | JHI_St_60k_v1 | DMT400024237 | GTTGCAATAATATGCCTCTGCTGTTTATTGGTGATGTTTTTCTTCCCTGCTTCCTCTCTA |
Microarray Signals from CUST_249_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 1224.35 | 92.0629 | 3.16701 | 0.18303 |
| ABA 1h | 1559.39 | 90.173 | 4.58259 | 0.400271 |
| ACC 1h | 713.953 | 159.283 | 1.70214 | 0.319138 |
| BABA 1h | 431.785 | 112.118 | 1.08854 | 0.200914 |
| Chitin 1h | 332.062 | 36.5464 | 0.950013 | 0.121613 |
| Epi 1h | 447.369 | 72.0661 | 1.3061 | 0.220262 |
| SA 1h | 505.228 | 52.9368 | 1.26659 | 0.147446 |
| Me-JA 1h | 226.304 | 23.6199 | 0.713655 | 0.0424316 |
| Control 6h | 423.836 | 51.8632 | 1.08329 | 0.063136 |
| ABA 6h | 983.472 | 167.524 | 2.32725 | 0.339061 |
| ACC 6h | 360.549 | 43.5096 | 0.806506 | 0.0473302 |
| BABA 6h | 281.871 | 26.283 | 0.649748 | 0.0520951 |
| Chitin 6h | 324.338 | 19.0614 | 0.792468 | 0.0465555 |
| Epi 6h | 434.353 | 48.6654 | 0.989097 | 0.177854 |
| SA 6h | 256.301 | 44.0345 | 0.653636 | 0.0575185 |
| Me-JA 6h | 217.167 | 31.1949 | 0.554938 | 0.037875 |
Source Transcript PGSC0003DMT400024237 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc04g076340.2 | +3 | 5e-96 | 290 | 156/171 (91%) | genomic_reference:SL2.50ch04 gene_region:58850229-58852842 transcript_region:SL2.50ch04:58850229..58852842+ functional_description:Unknown Protein (AHRD V1) |
| TAIR PP10 | AT4G38060.2 | +3 | 9e-16 | 75 | 41/88 (47%) | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:17873709-17874379 REVERSE LENGTH=136 |