Probe CUST_24056_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_24056_PI426222305 | JHI_St_60k_v1 | DMT400076512 | GTTGAAAGTGCTGAAAAGTATCGAGGCTATGATATATTGTAGCGGAATTCCACAATAATA |
All Microarray Probes Designed to Gene DMG400029750
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_23894_PI426222305 | JHI_St_60k_v1 | DMT400076513 | GTTGAAAGTGCTGAAAAGTATCGAGGCTATGATATATTGTAGCGGAATTCCACAATAATA |
CUST_24056_PI426222305 | JHI_St_60k_v1 | DMT400076512 | GTTGAAAGTGCTGAAAAGTATCGAGGCTATGATATATTGTAGCGGAATTCCACAATAATA |
Microarray Signals from CUST_24056_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 1316.29 | 128.958 | 1.00381 | 0.0691109 |
ABA 1h | 1327.96 | 77.5223 | 1.15141 | 0.0665298 |
ACC 1h | 1413.1 | 348.687 | 0.979334 | 0.222631 |
BABA 1h | 1373.15 | 103.404 | 1.09022 | 0.0630024 |
Chitin 1h | 974.471 | 56.5027 | 0.831897 | 0.048105 |
Epi 1h | 1149.02 | 158.202 | 1.0003 | 0.138598 |
SA 1h | 2858.53 | 165.313 | 2.13862 | 0.123496 |
Me-JA 1h | 1543.79 | 141.848 | 1.44307 | 0.137301 |
Control 6h | 987.261 | 203.779 | 0.721737 | 0.0979187 |
ABA 6h | 1362.9 | 104.965 | 0.980813 | 0.0684473 |
ACC 6h | 785.81 | 98.9414 | 0.519052 | 0.0402464 |
BABA 6h | 960.065 | 55.6734 | 0.658639 | 0.0457948 |
Chitin 6h | 819.675 | 47.542 | 0.591909 | 0.0342867 |
Epi 6h | 703.546 | 66.4591 | 0.475727 | 0.0834342 |
SA 6h | 1383.35 | 105.075 | 1.07032 | 0.0803155 |
Me-JA 6h | 1574.27 | 183.514 | 1.20041 | 0.0693549 |
Source Transcript PGSC0003DMT400076512 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 | AT1G25275.3 | +1 | 7e-12 | 59 | 32/66 (48%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:8860719-8861156 FORWARD LENGTH=85 |