Probe CUST_24038_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_24038_PI426222305 | JHI_St_60k_v1 | DMT400076533 | TGAATTCAGTGGCAGCTATGGCTATGGTGTTTATCATCCTTTTATCGGCCAACACCGACA |
All Microarray Probes Designed to Gene DMG400029754
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_24038_PI426222305 | JHI_St_60k_v1 | DMT400076533 | TGAATTCAGTGGCAGCTATGGCTATGGTGTTTATCATCCTTTTATCGGCCAACACCGACA |
Microarray Signals from CUST_24038_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 4826.84 | 402.089 | 1.01281 | 0.0584788 |
| ABA 1h | 5859.45 | 701.232 | 1.37801 | 0.134724 |
| ACC 1h | 5110.67 | 1078.66 | 0.998054 | 0.166654 |
| BABA 1h | 5631.11 | 859.504 | 1.20257 | 0.0804534 |
| Chitin 1h | 5482.17 | 509.051 | 1.27645 | 0.122293 |
| Epi 1h | 4715.23 | 447.985 | 1.13974 | 0.103602 |
| SA 1h | 6239.56 | 539.952 | 1.27381 | 0.0735466 |
| Me-JA 1h | 4644.44 | 492.352 | 1.1889 | 0.0686469 |
| Control 6h | 3894.91 | 825.326 | 0.776446 | 0.12026 |
| ABA 6h | 15585 | 1986.61 | 3.04724 | 0.215024 |
| ACC 6h | 4835.2 | 554.28 | 0.879189 | 0.0507652 |
| BABA 6h | 4803.02 | 335.605 | 0.902053 | 0.052085 |
| Chitin 6h | 3667.75 | 381.336 | 0.720375 | 0.0519594 |
| Epi 6h | 3674.33 | 212.348 | 0.687764 | 0.0397153 |
| SA 6h | 2642.66 | 609.952 | 0.527606 | 0.0829993 |
| Me-JA 6h | 3404.76 | 396.848 | 0.711502 | 0.0410854 |
Source Transcript PGSC0003DMT400076533 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G25275.3 | +1 | 9e-12 | 57 | 27/65 (42%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:8860719-8861156 FORWARD LENGTH=85 |