Probe CUST_18572_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_18572_PI426222305 JHI_St_60k_v1 DMT400005271 GGGATTCTCTCATACTCCTGGTTTTCCTCTAGTTTCATTATATGTAGATATTGGTATTCT

All Microarray Probes Designed to Gene DMG400002075

Probe IDChip nameTranscript IDProbe Sequence
CUST_18505_PI426222305 JHI_St_60k_v1 DMT400005270 TGGGTAATCGCCATCATAACATTGTTAACCTTCTTGCTGATGCTAAAAGACCTGCAATGA
CUST_18572_PI426222305 JHI_St_60k_v1 DMT400005271 GGGATTCTCTCATACTCCTGGTTTTCCTCTAGTTTCATTATATGTAGATATTGGTATTCT
CUST_18601_PI426222305 JHI_St_60k_v1 DMT400005273 GAACAATCTCCAGGGATTCTCTCATACTCCTGGTTTTCCTCTAGTTTCATTATATGTAGA


Microarray Signals from CUST_18572_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h360.04866.71841.544140.177417
ABA 1h159.5089.731190.7964470.0484558
ACC 1h254.6862.57211.026680.202561
BABA 1h190.52421.63160.8640020.0523312
Chitin 1h146.60610.68260.7188280.0711899
Epi 1h172.34112.7570.8777690.0533048
SA 1h160.57311.50070.6889740.0892049
Me-JA 1h78.80237.665260.4239020.0301945
Control 6h418.27295.75681.732320.315339
ABA 6h75.315618.73720.2956330.0874378
ACC 6h273.21448.67491.01840.12127
BABA 6h330.57276.90511.245190.265796
Chitin 6h423.11626.43031.754250.102403
Epi 6h404.358.91361.551380.357322
SA 6h332.83961.25881.432480.129065
Me-JA 6h296.8356.63171.268440.156176

Source Transcript PGSC0003DMT400005271 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT4G04900.1 +2 2e-23 97 62/121 (51%) ROP-interactive CRIB motif-containing protein 10 | chr4:2486218-2487779 REVERSE LENGTH=156

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400005271

Click here to view details at Spud DB Genome Browser (opens in new window)