Probe CUST_18425_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_18425_PI426222305 | JHI_St_60k_v1 | DMT400043099 | CTACTACCTACTCTGAAGAGTTTTGCATAGTCACAAGCAAATTTTCTCCAGAATTTAAGT |
All Microarray Probes Designed to Gene DMG400016719
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_18471_PI426222305 | JHI_St_60k_v1 | DMT400043098 | CTACTACCTACTCTGAAGAGTTTTGCATAGTCACAAGCAAATTTTCTCCAGAATTTAAGT |
| CUST_18425_PI426222305 | JHI_St_60k_v1 | DMT400043099 | CTACTACCTACTCTGAAGAGTTTTGCATAGTCACAAGCAAATTTTCTCCAGAATTTAAGT |
Microarray Signals from CUST_18425_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 9.12366 | 3.662 | 0.697288 | 0.332911 |
| ABA 1h | 6.17708 | 3.58988 | 0.579261 | 0.335866 |
| ACC 1h | 11.3663 | 4.16327 | 0.873504 | 0.360137 |
| BABA 1h | 10.8706 | 4.10908 | 0.824279 | 0.386169 |
| Chitin 1h | 9.57507 | 3.78136 | 0.792842 | 0.378929 |
| Epi 1h | 13.8387 | 4.37326 | 1.17448 | 0.484601 |
| SA 1h | 13.0258 | 4.52788 | 0.934636 | 0.407358 |
| Me-JA 1h | 15.3372 | 5.94924 | 1.34691 | 0.450844 |
| Control 6h | 20.4565 | 6.8749 | 1.41976 | 0.589679 |
| ABA 6h | 6.83722 | 3.96662 | 0.533704 | 0.309046 |
| ACC 6h | 13.175 | 4.75918 | 0.876746 | 0.365184 |
| BABA 6h | 21.865 | 7.98115 | 1.32143 | 0.732984 |
| Chitin 6h | 17.3655 | 5.85511 | 1.18449 | 0.482345 |
| Epi 6h | 25.3707 | 5.84678 | 1.75319 | 0.617209 |
| SA 6h | 22.4501 | 4.19223 | 1.86851 | 0.361047 |
| Me-JA 6h | 16.4138 | 4.07386 | 1.29358 | 0.345029 |
Source Transcript PGSC0003DMT400043099 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G65900.1 | +3 | 5e-160 | 464 | 221/341 (65%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 306 Blast hits to 306 proteins in 119 species: Archae - 19; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | chr1:24516023-24518325 REVERSE LENGTH=408 |