Probe CUST_17762_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_17762_PI426222305 | JHI_St_60k_v1 | DMT400066765 | AAAGAGGGGTGGCTCTGCTTATCGATGTATTTGTGTATATTTAGAAGATTTAAATCAGCC |
All Microarray Probes Designed to Gene DMG401025958
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_17773_PI426222305 | JHI_St_60k_v1 | DMT400066764 | AAAGAGGGGTGGCTCTGCTTATCGATGTATTTGTGTATATTTAGAAGATTTAAATCAGCC |
| CUST_17732_PI426222305 | JHI_St_60k_v1 | DMT400066766 | AAAGAGGGGTGGCTCTGCTTATCGATGTATTTGTGTATATTTAGAAGATTTAAATCAGCC |
| CUST_17762_PI426222305 | JHI_St_60k_v1 | DMT400066765 | AAAGAGGGGTGGCTCTGCTTATCGATGTATTTGTGTATATTTAGAAGATTTAAATCAGCC |
Microarray Signals from CUST_17762_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 85.372 | 5.76998 | 1.20098 | 0.0812384 |
| ABA 1h | 76.8788 | 9.57564 | 1.20416 | 0.105134 |
| ACC 1h | 95.3784 | 20.1221 | 1.24146 | 0.202971 |
| BABA 1h | 70.922 | 10.451 | 1.01276 | 0.076055 |
| Chitin 1h | 54.4791 | 8.54052 | 0.832192 | 0.111114 |
| Epi 1h | 66.7356 | 15.265 | 1.02158 | 0.266615 |
| SA 1h | 82.3872 | 19.5121 | 1.07053 | 0.293004 |
| Me-JA 1h | 42.8038 | 3.94267 | 0.735749 | 0.0679495 |
| Control 6h | 71.9573 | 28.3807 | 0.758171 | 0.491443 |
| ABA 6h | 81.9677 | 8.45736 | 1.07553 | 0.0756458 |
| ACC 6h | 66.2564 | 5.3844 | 0.813299 | 0.137412 |
| BABA 6h | 81.4145 | 10.2208 | 1.00744 | 0.100462 |
| Chitin 6h | 69.0349 | 6.40723 | 0.905764 | 0.0698349 |
| Epi 6h | 50.1273 | 13.9432 | 0.584107 | 0.153915 |
| SA 6h | 38.9972 | 4.51565 | 0.547777 | 0.127468 |
| Me-JA 6h | 56.9098 | 14.7739 | 0.757702 | 0.133955 |
Source Transcript PGSC0003DMT400066765 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT2G45380.1 | +2 | 5e-32 | 126 | 81/225 (36%) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr2:18699588-18703093 REVERSE LENGTH=494 |