Probe CUST_17421_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_17421_PI426222305 | JHI_St_60k_v1 | DMT400008367 | CTCTTTCCCCTGTTACAGAGATTGTTTCCATACTGTAATGAGAAATATTGCTGGTTTATA |
All Microarray Probes Designed to Gene DMG400003229
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_17421_PI426222305 | JHI_St_60k_v1 | DMT400008367 | CTCTTTCCCCTGTTACAGAGATTGTTTCCATACTGTAATGAGAAATATTGCTGGTTTATA |
Microarray Signals from CUST_17421_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 3409.91 | 399.138 | 0.3458 | 0.0199672 |
| ABA 1h | 2753.57 | 159.102 | 0.319713 | 0.0184616 |
| ACC 1h | 3231.39 | 218.647 | 0.321869 | 0.0185863 |
| BABA 1h | 5404.14 | 1117.52 | 0.549902 | 0.0704207 |
| Chitin 1h | 6694.78 | 387.119 | 0.764028 | 0.0732119 |
| Epi 1h | 3856.15 | 223.072 | 0.457039 | 0.0263895 |
| SA 1h | 4602.16 | 644.163 | 0.450388 | 0.0445068 |
| Me-JA 1h | 4415.7 | 404.036 | 0.551308 | 0.0318321 |
| Control 6h | 17221.7 | 1858.9 | 1.74358 | 0.100666 |
| ABA 6h | 13396.9 | 877.122 | 1.28968 | 0.0744601 |
| ACC 6h | 17309.3 | 1153.1 | 1.54396 | 0.114355 |
| BABA 6h | 14122.8 | 1171.71 | 1.28807 | 0.0984814 |
| Chitin 6h | 16713.5 | 965.57 | 1.6126 | 0.0931042 |
| Epi 6h | 16998.9 | 983.428 | 1.54623 | 0.0897401 |
| SA 6h | 13667.7 | 2214.12 | 1.37768 | 0.0848309 |
| Me-JA 6h | 12820 | 1670.39 | 1.29908 | 0.0750028 |
Source Transcript PGSC0003DMT400008367 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G57680.1 | +1 | 9e-24 | 102 | 91/300 (30%) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 70 Blast hits to 70 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr1:21362749-21363837 REVERSE LENGTH=362 |