Probe CUST_1693_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1693_PI426222305 | JHI_St_60k_v1 | DMT400021824 | GCCTTATCTTGGGTTGGCCAAGAAAGTATATTATCTGTATTCTGGATTCTGAAATGATTA |
All Microarray Probes Designed to Gene DMG400008472
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1693_PI426222305 | JHI_St_60k_v1 | DMT400021824 | GCCTTATCTTGGGTTGGCCAAGAAAGTATATTATCTGTATTCTGGATTCTGAAATGATTA |
Microarray Signals from CUST_1693_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 30050.9 | 3938.41 | 1.45042 | 0.0925629 |
| ABA 1h | 18887.7 | 1935.61 | 1.03734 | 0.157846 |
| ACC 1h | 32734.4 | 2108.23 | 1.55853 | 0.0899819 |
| BABA 1h | 19872.7 | 2029.28 | 1.0008 | 0.0577815 |
| Chitin 1h | 17739 | 3418.59 | 0.935968 | 0.183475 |
| Epi 1h | 19239.5 | 1112.01 | 1.09008 | 0.0629363 |
| SA 1h | 26938.7 | 3983.87 | 1.2615 | 0.190478 |
| Me-JA 1h | 27984.3 | 1618.5 | 1.67986 | 0.0969868 |
| Control 6h | 23190.1 | 4876.33 | 1.07999 | 0.149771 |
| ABA 6h | 5132.72 | 611.046 | 0.233548 | 0.0357625 |
| ACC 6h | 16332.3 | 2942.49 | 0.677997 | 0.0391446 |
| BABA 6h | 19675.3 | 3120.14 | 0.842861 | 0.13229 |
| Chitin 6h | 22816.9 | 1951.4 | 1.04498 | 0.0603322 |
| Epi 6h | 20770.4 | 3238.41 | 0.879822 | 0.211878 |
| SA 6h | 16866.9 | 2638.39 | 0.817668 | 0.0847462 |
| Me-JA 6h | 16846.8 | 1155.13 | 0.826534 | 0.0477202 |
Source Transcript PGSC0003DMT400021824 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc06g051400.2 | +3 | 0.0 | 861 | 417/436 (96%) | genomic_reference:SL2.50ch06 gene_region:31251815-31254230 transcript_region:SL2.50ch06:31251815..31254230+ go_terms:GO:0042389 functional_description:Omega-3 fatty acid desaturase (AHRD V1 **** Q7X7I9_SOLLC); contains Interpro domain(s) IPR005804 Fatty acid desaturase, type 1 |
| TAIR PP10 | AT5G05580.1 | +3 | 0.0 | 668 | 331/438 (76%) | fatty acid desaturase 8 | chr5:1664331-1666345 FORWARD LENGTH=435 |