Probe CUST_16858_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_16858_PI426222305 JHI_St_60k_v1 DMT400068830 TTGATCATTGATATTTCTGAGACCATGAGTTACACGGGTTCTCTTTACTTGGATGTTGTT

All Microarray Probes Designed to Gene DMG402026767

Probe IDChip nameTranscript IDProbe Sequence
CUST_16828_PI426222305 JHI_St_60k_v1 DMT400068828 AGATGCTTATGTGTACCTCACTCGTTGACAGTGCTCACACTGATAGCATCATTACTGAAG
CUST_16858_PI426222305 JHI_St_60k_v1 DMT400068830 TTGATCATTGATATTTCTGAGACCATGAGTTACACGGGTTCTCTTTACTTGGATGTTGTT
CUST_16847_PI426222305 JHI_St_60k_v1 DMT400068829 ATGGATTCCGCTGATCCTGCTCGGGCATTTGTAAAGGATGTCAAACGAATCATTATTAAG


Microarray Signals from CUST_16858_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h30.85378.598840.8965510.262407
ABA 1h199.48859.11296.46191.88276
ACC 1h22.9073.679750.6833190.130073
BABA 1h39.42454.036031.261160.247287
Chitin 1h36.55973.731511.266850.129187
Epi 1h29.14983.46831.037870.139445
SA 1h22.86988.434950.5484690.446397
Me-JA 1h13.61864.124540.4636640.240141
Control 6h32.826910.54170.8730410.324494
ABA 6h449.59681.298412.68622.07706
ACC 6h19.97814.057710.538470.107953
BABA 6h43.402910.56611.130950.278515
Chitin 6h27.17766.419190.741420.224949
Epi 6h24.23838.474960.5508790.390686
SA 6h17.95949.290370.4252120.396526
Me-JA 6h45.191613.00081.30880.26436

Source Transcript PGSC0003DMT400068830 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT2G39800.1 +3 4e-77 251 122/167 (73%) delta1-pyrroline-5-carboxylate synthase 1 | chr2:16598516-16602939 REVERSE LENGTH=717

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400068830

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