Probe CUST_16828_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_16828_PI426222305 JHI_St_60k_v1 DMT400068828 AGATGCTTATGTGTACCTCACTCGTTGACAGTGCTCACACTGATAGCATCATTACTGAAG

All Microarray Probes Designed to Gene DMG402026767

Probe IDChip nameTranscript IDProbe Sequence
CUST_16828_PI426222305 JHI_St_60k_v1 DMT400068828 AGATGCTTATGTGTACCTCACTCGTTGACAGTGCTCACACTGATAGCATCATTACTGAAG
CUST_16858_PI426222305 JHI_St_60k_v1 DMT400068830 TTGATCATTGATATTTCTGAGACCATGAGTTACACGGGTTCTCTTTACTTGGATGTTGTT
CUST_16847_PI426222305 JHI_St_60k_v1 DMT400068829 ATGGATTCCGCTGATCCTGCTCGGGCATTTGTAAAGGATGTCAAACGAATCATTATTAAG


Microarray Signals from CUST_16828_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h11.75995.536431.185810.54831
ABA 1h7.710673.518981.034180.513744
ACC 1h7.980584.352020.9519390.513458
BABA 1h7.975733.879721.002890.509986
Chitin 1h9.664423.818181.152790.548615
Epi 1h7.661443.601871.073890.532637
SA 1h6.441843.656650.7745110.439491
Me-JA 1h11.91225.455481.48730.660599
Control 6h13.1083.986111.589910.506224
ABA 6h109.3167.4944212.68110.869115
ACC 6h8.220114.531840.8709790.471973
BABA 6h14.47164.948061.413240.537968
Chitin 6h9.31894.344181.050790.513919
Epi 6h12.27514.862911.220520.528502
SA 6h12.64355.635181.318240.610106
Me-JA 6h12.04495.447861.240370.573603

Source Transcript PGSC0003DMT400068828 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT3G55610.1 +1 2e-49 167 81/92 (88%) delta 1-pyrroline-5-carboxylate synthase 2 | chr3:20624278-20628989 REVERSE LENGTH=726

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400068828

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