Probe CUST_1579_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_1579_PI426222305 JHI_St_60k_v1 DMT400043631 GCAGCTTTTGACAATCATTTCTTCTGGAAATCCAAAGGAAGAAACATTTCCTAGATCCAG

All Microarray Probes Designed to Gene DMG400016941

Probe IDChip nameTranscript IDProbe Sequence
CUST_1579_PI426222305 JHI_St_60k_v1 DMT400043631 GCAGCTTTTGACAATCATTTCTTCTGGAAATCCAAAGGAAGAAACATTTCCTAGATCCAG
CUST_1613_PI426222305 JHI_St_60k_v1 DMT400043632 GCAGCTTTTGACAATCATTTCTTCTGGAAATCCAAAGGAAGAAACATTTCCTAGATCCAG


Microarray Signals from CUST_1579_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h95.82446.369951.619410.109724
ABA 1h44.051110.40290.7970920.24377
ACC 1h53.150522.28070.6049520.546354
BABA 1h56.6836.422570.9845860.0827414
Chitin 1h43.34284.093420.8132210.076408
Epi 1h55.191811.4951.034750.222648
SA 1h42.28614.009140.691510.066281
Me-JA 1h15.87865.17930.2820960.139884
Control 6h118.53633.4451.851010.425942
ABA 6h21.2333.690080.330.0605684
ACC 6h106.51526.28441.481790.427541
BABA 6h81.120121.47471.148910.284591
Chitin 6h105.81526.0921.557430.495142
Epi 6h78.496720.06911.111210.30366
SA 6h79.253126.42921.211070.483489
Me-JA 6h77.727623.23991.217480.258798

Source Transcript PGSC0003DMT400043631 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG) Solyc06g051460.2 +2 0.0 867 480/580 (83%) genomic_reference:SL2.50ch06 gene_region:31369126-31374317 transcript_region:SL2.50ch06:31369126..31374317- functional_description:ATP-dependent chaperone ClpB (AHRD V1 *--- C0GC24_9FIRM)
TAIR PP10 AT2G29970.1 +3 1e-167 365 239/505 (47%) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein | chr2:12776601-12779784 FORWARD LENGTH=1002

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043631

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