Probe CUST_1545_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1545_PI426222305 | JHI_St_60k_v1 | DMT400026190 | CATATAATATGATCATTTACTCTCACTAACTCTAGATTCTGGATTCACCTCGTCTCTACT |
All Microarray Probes Designed to Gene DMG400010092
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1459_PI426222305 | JHI_St_60k_v1 | DMT400026191 | CCTTGAAACTTCTCTCCCGTACCTCAAAGGTATTTTTTCACACAATCAATAATCTATAAC |
| CUST_1545_PI426222305 | JHI_St_60k_v1 | DMT400026190 | CATATAATATGATCATTTACTCTCACTAACTCTAGATTCTGGATTCACCTCGTCTCTACT |
| CUST_895_PI426222305 | JHI_St_60k_v1 | DMT400026192 | CACAACGCCTTCCTTGCAAACACTGAATAGTAATATTTGTATGGTACTTACCTCAAAATA |
Microarray Signals from CUST_1545_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 100.928 | 17.0586 | 1.85932 | 0.192883 |
| ABA 1h | 34.4106 | 12.8972 | 0.63129 | 0.326287 |
| ACC 1h | 28.2743 | 10.8917 | 0.409791 | 0.227682 |
| BABA 1h | 14.9757 | 4.81375 | 0.25256 | 0.0871773 |
| Chitin 1h | 7.87707 | 3.00136 | 0.155905 | 0.0687913 |
| Epi 1h | 33.7987 | 6.9957 | 0.703507 | 0.185447 |
| SA 1h | 17.4705 | 10.4806 | 0.223759 | 0.183149 |
| Me-JA 1h | 8.12798 | 3.10672 | 0.179837 | 0.0748786 |
| Control 6h | 299.867 | 111.859 | 4.99168 | 1.73488 |
| ABA 6h | 41.1431 | 5.45503 | 0.719443 | 0.137353 |
| ACC 6h | 145.44 | 27.382 | 2.30483 | 0.379071 |
| BABA 6h | 68.7131 | 16.1021 | 1.1029 | 0.26143 |
| Chitin 6h | 95.0159 | 6.47462 | 1.68351 | 0.114696 |
| Epi 6h | 105.605 | 18.3192 | 1.7115 | 0.233669 |
| SA 6h | 101.264 | 36.8745 | 1.7165 | 0.504774 |
| Me-JA 6h | 69.284 | 16.9043 | 1.23472 | 0.313534 |
Source Transcript PGSC0003DMT400026190 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g089770.2 | +3 | 3e-126 | 376 | 182/191 (95%) | genomic_reference:SL2.50ch02 gene_region:46055433-46058696 transcript_region:SL2.50ch02:46055433..46058696+ go_terms:GO:0004022,GO:0045551 functional_description:Dihydroflavonol-4-reductase (AHRD V1 ***- B6TK03_MAIZE); contains Interpro domain(s) IPR016040 NAD(P)-binding domain |
| TAIR PP10 | AT5G14700.1 | +3 | 2e-39 | 148 | 72/163 (44%) | NAD(P)-binding Rossmann-fold superfamily protein | chr5:4740502-4743327 REVERSE LENGTH=368 |