Probe CUST_1534_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1534_PI426222305 | JHI_St_60k_v1 | DMT400026180 | AAATACAAACTTGGTTTGCTCACATATCATGATTTGCACATTAGGGACCCGAGAATCATG |
All Microarray Probes Designed to Gene DMG400010090
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_745_PI426222305 | JHI_St_60k_v1 | DMT400026179 | AAATACAAACTTGGTTTGCTCACATATCATGATTTGCACATTAGGGACCCGAGAATCATG |
| CUST_1405_PI426222305 | JHI_St_60k_v1 | DMT400026181 | AAATACAAACTTGGTTTGCTCACATATCATGATTTGCACATTAGGGACCCGAGAATCATG |
| CUST_1534_PI426222305 | JHI_St_60k_v1 | DMT400026180 | AAATACAAACTTGGTTTGCTCACATATCATGATTTGCACATTAGGGACCCGAGAATCATG |
Microarray Signals from CUST_1534_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 21.5817 | 7.30016 | 1.2581 | 0.515417 |
| ABA 1h | 14.328 | 5.39388 | 0.944249 | 0.300163 |
| ACC 1h | 16.917 | 4.59974 | 1.01104 | 0.3409 |
| BABA 1h | 15.9487 | 3.56369 | 1.10657 | 0.247112 |
| Chitin 1h | 11.8197 | 3.35364 | 0.810275 | 0.271507 |
| Epi 1h | 14.4274 | 3.32836 | 1.09329 | 0.266746 |
| SA 1h | 9.9522 | 3.94487 | 0.561626 | 0.25213 |
| Me-JA 1h | 5.82724 | 3.38409 | 0.476279 | 0.275888 |
| Control 6h | 13.2104 | 4.08935 | 0.798809 | 0.262603 |
| ABA 6h | 12.7213 | 3.52814 | 0.788572 | 0.226994 |
| ACC 6h | 19.3118 | 4.33691 | 1.10968 | 0.241323 |
| BABA 6h | 17.9024 | 4.02688 | 1.0122 | 0.245544 |
| Chitin 6h | 10.0227 | 3.75973 | 0.557426 | 0.263005 |
| Epi 6h | 23.432 | 4.17808 | 1.38865 | 0.246945 |
| SA 6h | 14.8402 | 3.63428 | 0.978641 | 0.253619 |
| Me-JA 6h | 15.9304 | 7.02186 | 0.857341 | 0.390812 |
Source Transcript PGSC0003DMT400026180 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g065550.2 | +3 | 4e-137 | 403 | 203/341 (60%) | genomic_reference:SL2.50ch02 gene_region:31286098-31288095 transcript_region:SL2.50ch02:31286098..31288095- functional_description:Coiled-coil domain-containing protein 109A (AHRD V1 *--- C109A_MOUSE); contains Interpro domain(s) IPR006769 Protein of unknown function DUF607 |
| TAIR PP10 | AT2G23790.1 | +3 | 2e-109 | 332 | 169/335 (50%) | Protein of unknown function (DUF607) | chr2:10125692-10127455 REVERSE LENGTH=336 |