Probe CUST_1472_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1472_PI426222305 | JHI_St_60k_v1 | DMT400003637 | ATTGTTCATGATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCT |
All Microarray Probes Designed to Gene DMG400001434
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1373_PI426222305 | JHI_St_60k_v1 | DMT400003636 | GATGTGTCCTGTTGTTTTGTTAGATGACATGAATAATCCGCTTATGCATCTAAACTTGAT |
| CUST_1472_PI426222305 | JHI_St_60k_v1 | DMT400003637 | ATTGTTCATGATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCT |
Microarray Signals from CUST_1472_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 264.615 | 27.4976 | 0.806481 | 0.0917648 |
| ABA 1h | 161.9 | 10.7347 | 0.561718 | 0.034338 |
| ACC 1h | 610.457 | 182.469 | 1.62532 | 0.513836 |
| BABA 1h | 259.927 | 57.9653 | 0.78524 | 0.117628 |
| Chitin 1h | 193.266 | 25.7481 | 0.649757 | 0.148161 |
| Epi 1h | 231.443 | 30.2529 | 0.810408 | 0.106467 |
| SA 1h | 1068.18 | 239.479 | 3.05979 | 0.53648 |
| Me-JA 1h | 78.5284 | 7.21818 | 0.293947 | 0.054579 |
| Control 6h | 651.713 | 168.896 | 1.8365 | 0.425272 |
| ABA 6h | 303.931 | 28.5043 | 0.873047 | 0.0515975 |
| ACC 6h | 438.991 | 124.952 | 1.08351 | 0.195088 |
| BABA 6h | 468.622 | 104.297 | 1.21497 | 0.280314 |
| Chitin 6h | 395.688 | 27.7513 | 1.14021 | 0.0989655 |
| Epi 6h | 642.136 | 211.013 | 1.59264 | 0.528566 |
| SA 6h | 540.299 | 46.7493 | 1.67095 | 0.0972133 |
| Me-JA 6h | 355.85 | 93.8267 | 1.00785 | 0.245377 |
Source Transcript PGSC0003DMT400003637 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g088340.2 | +1 | 0.0 | 835 | 427/460 (93%) | genomic_reference:SL2.50ch02 gene_region:45045827-45048579 transcript_region:SL2.50ch02:45045827..45048579- go_terms:GO:0005515,GO:0003700 functional_description:WRKY transcription factor-c (AHRD V1 **** Q5DJV3_CAPAN); contains Interpro domain(s) IPR003657 DNA-binding WRKY |
| TAIR PP10 | AT2G03340.1 | +1 | 3e-105 | 330 | 211/483 (44%) | WRKY DNA-binding protein 3 | chr2:1014724-1016936 REVERSE LENGTH=513 |