Probe CUST_1405_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1405_PI426222305 | JHI_St_60k_v1 | DMT400026181 | AAATACAAACTTGGTTTGCTCACATATCATGATTTGCACATTAGGGACCCGAGAATCATG |
All Microarray Probes Designed to Gene DMG400010090
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_745_PI426222305 | JHI_St_60k_v1 | DMT400026179 | AAATACAAACTTGGTTTGCTCACATATCATGATTTGCACATTAGGGACCCGAGAATCATG |
| CUST_1405_PI426222305 | JHI_St_60k_v1 | DMT400026181 | AAATACAAACTTGGTTTGCTCACATATCATGATTTGCACATTAGGGACCCGAGAATCATG |
| CUST_1534_PI426222305 | JHI_St_60k_v1 | DMT400026180 | AAATACAAACTTGGTTTGCTCACATATCATGATTTGCACATTAGGGACCCGAGAATCATG |
Microarray Signals from CUST_1405_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 14.0677 | 3.4646 | 0.837304 | 0.227899 |
| ABA 1h | 17.2086 | 4.86892 | 1.10063 | 0.361663 |
| ACC 1h | 34.9189 | 7.42405 | 2.0416 | 0.638113 |
| BABA 1h | 10.9757 | 3.47515 | 0.665915 | 0.251744 |
| Chitin 1h | 10.6355 | 3.34978 | 0.703236 | 0.2587 |
| Epi 1h | 14.9924 | 3.31454 | 1.03969 | 0.271287 |
| SA 1h | 10.2184 | 3.23587 | 0.591177 | 0.208897 |
| Me-JA 1h | 7.94614 | 3.35096 | 0.579628 | 0.278437 |
| Control 6h | 22.2285 | 4.49159 | 1.33459 | 0.263005 |
| ABA 6h | 15.5864 | 4.95706 | 0.846276 | 0.241825 |
| ACC 6h | 21.9133 | 4.31574 | 1.19818 | 0.234229 |
| BABA 6h | 21.4466 | 4.04404 | 1.20905 | 0.228343 |
| Chitin 6h | 13.8173 | 4.32481 | 0.733536 | 0.291705 |
| Epi 6h | 23.0796 | 6.61724 | 1.19347 | 0.406199 |
| SA 6h | 14.3702 | 4.20808 | 0.820664 | 0.384317 |
| Me-JA 6h | 6.5148 | 3.49282 | 0.412261 | 0.222257 |
Source Transcript PGSC0003DMT400026181 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g089840.2 | +3 | 1e-147 | 433 | 227/248 (92%) | genomic_reference:SL2.50ch02 gene_region:46129231-46130747 transcript_region:SL2.50ch02:46129231..46130747+ functional_description:Transcription factor (AHRD V1 **-- D7MBD5_ARALY); contains Interpro domain(s) IPR006769 Protein of unknown function DUF607 |
| TAIR PP10 | AT2G23790.1 | +3 | 3e-54 | 191 | 88/135 (65%) | Protein of unknown function (DUF607) | chr2:10125692-10127455 REVERSE LENGTH=336 |