Probe CUST_1389_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_1389_PI426222305 JHI_St_60k_v1 DMT400025953 TTGGTTTGGGATTGTAACAATTGAATTTGAAGCAATGTGAACAGGTGAATAAGATCTTCG

All Microarray Probes Designed to Gene DMG400010021

Probe IDChip nameTranscript IDProbe Sequence
CUST_919_PI426222305 JHI_St_60k_v1 DMT400025952 TTAGCCAACTGCATTAGTTGTGTATGCAGGGGGGCAATGTTATCCAATTCACAGCAAAGC
CUST_1389_PI426222305 JHI_St_60k_v1 DMT400025953 TTGGTTTGGGATTGTAACAATTGAATTTGAAGCAATGTGAACAGGTGAATAAGATCTTCG


Microarray Signals from CUST_1389_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h102.0829.441782.112110.137276
ABA 1h78.716920.93991.737260.565757
ACC 1h147.61721.97262.927480.236585
BABA 1h58.6966.458331.255750.275442
Chitin 1h93.030833.5381.810971.13564
Epi 1h79.167415.05221.828210.384583
SA 1h70.968118.44031.350810.455712
Me-JA 1h57.840713.51981.377980.543789
Control 6h41.633110.39970.7981680.172945
ABA 6h7.334913.301070.136810.067754
ACC 6h47.718621.48740.7173270.22991
BABA 6h35.04278.20250.6126380.140782
Chitin 6h48.7277.468020.9341460.109383
Epi 6h35.91599.625910.6149730.244225
SA 6h11.3013.460730.2159270.0818616
Me-JA 6h7.60333.216850.154690.0692827

Source Transcript PGSC0003DMT400025953 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG) Solyc02g090540.2 +3 3e-154 439 240/250 (96%) genomic_reference:SL2.50ch02 gene_region:46644757-46646996 transcript_region:SL2.50ch02:46644757..46646996- go_terms:GO:0050327 functional_description:Short-chain dehydrogenase/reductase family protein (AHRD V1 **** D7LTG0_ARALY); contains Interpro domain(s) IPR002347 Glucose/ribitol dehydrogenase
TAIR PP10 AT3G50560.1 +3 8e-105 314 171/268 (64%) NAD(P)-binding Rossmann-fold superfamily protein | chr3:18761247-18763835 REVERSE LENGTH=272

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400025953

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