Probe CUST_1389_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_1389_PI426222305 | JHI_St_60k_v1 | DMT400025953 | TTGGTTTGGGATTGTAACAATTGAATTTGAAGCAATGTGAACAGGTGAATAAGATCTTCG |
All Microarray Probes Designed to Gene DMG400010021
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_919_PI426222305 | JHI_St_60k_v1 | DMT400025952 | TTAGCCAACTGCATTAGTTGTGTATGCAGGGGGGCAATGTTATCCAATTCACAGCAAAGC |
CUST_1389_PI426222305 | JHI_St_60k_v1 | DMT400025953 | TTGGTTTGGGATTGTAACAATTGAATTTGAAGCAATGTGAACAGGTGAATAAGATCTTCG |
Microarray Signals from CUST_1389_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 102.082 | 9.44178 | 2.11211 | 0.137276 |
ABA 1h | 78.7169 | 20.9399 | 1.73726 | 0.565757 |
ACC 1h | 147.617 | 21.9726 | 2.92748 | 0.236585 |
BABA 1h | 58.696 | 6.45833 | 1.25575 | 0.275442 |
Chitin 1h | 93.0308 | 33.538 | 1.81097 | 1.13564 |
Epi 1h | 79.1674 | 15.0522 | 1.82821 | 0.384583 |
SA 1h | 70.9681 | 18.4403 | 1.35081 | 0.455712 |
Me-JA 1h | 57.8407 | 13.5198 | 1.37798 | 0.543789 |
Control 6h | 41.6331 | 10.3997 | 0.798168 | 0.172945 |
ABA 6h | 7.33491 | 3.30107 | 0.13681 | 0.067754 |
ACC 6h | 47.7186 | 21.4874 | 0.717327 | 0.22991 |
BABA 6h | 35.0427 | 8.2025 | 0.612638 | 0.140782 |
Chitin 6h | 48.727 | 7.46802 | 0.934146 | 0.109383 |
Epi 6h | 35.9159 | 9.62591 | 0.614973 | 0.244225 |
SA 6h | 11.301 | 3.46073 | 0.215927 | 0.0818616 |
Me-JA 6h | 7.6033 | 3.21685 | 0.15469 | 0.0692827 |
Source Transcript PGSC0003DMT400025953 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | Solyc02g090540.2 | +3 | 3e-154 | 439 | 240/250 (96%) | genomic_reference:SL2.50ch02 gene_region:46644757-46646996 transcript_region:SL2.50ch02:46644757..46646996- go_terms:GO:0050327 functional_description:Short-chain dehydrogenase/reductase family protein (AHRD V1 **** D7LTG0_ARALY); contains Interpro domain(s) IPR002347 Glucose/ribitol dehydrogenase |
TAIR PP10 | AT3G50560.1 | +3 | 8e-105 | 314 | 171/268 (64%) | NAD(P)-binding Rossmann-fold superfamily protein | chr3:18761247-18763835 REVERSE LENGTH=272 |