Probe CUST_1373_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_1373_PI426222305 JHI_St_60k_v1 DMT400003636 GATGTGTCCTGTTGTTTTGTTAGATGACATGAATAATCCGCTTATGCATCTAAACTTGAT

All Microarray Probes Designed to Gene DMG400001434

Probe IDChip nameTranscript IDProbe Sequence
CUST_1373_PI426222305 JHI_St_60k_v1 DMT400003636 GATGTGTCCTGTTGTTTTGTTAGATGACATGAATAATCCGCTTATGCATCTAAACTTGAT
CUST_1472_PI426222305 JHI_St_60k_v1 DMT400003637 ATTGTTCATGATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCT


Microarray Signals from CUST_1373_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h39.59843.991810.9816180.0925149
ABA 1h18.38926.705560.4344110.206198
ACC 1h127.45753.56932.425231.3572
BABA 1h33.01669.531430.7672440.202257
Chitin 1h20.153.113290.5507830.0883617
Epi 1h35.99025.405481.014380.152877
SA 1h113.5457.186282.760650.274526
Me-JA 1h8.988282.994460.2691740.0972604
Control 6h99.604731.86972.13610.776213
ABA 6h36.3583.735120.851980.0883307
ACC 6h56.25218.70221.107610.218931
BABA 6h59.681213.33611.262770.260768
Chitin 6h54.73144.564791.285940.10725
Epi 6h72.547513.81431.54650.422974
SA 6h39.45348.952950.9441530.131235
Me-JA 6h38.488411.62790.8898330.213835

Source Transcript PGSC0003DMT400003636 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG) Solyc02g088340.2 +2 9e-28 109 51/54 (94%) genomic_reference:SL2.50ch02 gene_region:45045827-45048579 transcript_region:SL2.50ch02:45045827..45048579- go_terms:GO:0005515,GO:0003700 functional_description:WRKY transcription factor-c (AHRD V1 **** Q5DJV3_CAPAN); contains Interpro domain(s) IPR003657 DNA-binding WRKY
TAIR PP10 AT3G01080.1 +2 2e-17 80 34/44 (77%) WRKY DNA-binding protein 58 | chr3:25507-27449 FORWARD LENGTH=423

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003636

Click here to view details at Spud DB Genome Browser (opens in new window)