Probe CUST_1373_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_1373_PI426222305 | JHI_St_60k_v1 | DMT400003636 | GATGTGTCCTGTTGTTTTGTTAGATGACATGAATAATCCGCTTATGCATCTAAACTTGAT |
All Microarray Probes Designed to Gene DMG400001434
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_1373_PI426222305 | JHI_St_60k_v1 | DMT400003636 | GATGTGTCCTGTTGTTTTGTTAGATGACATGAATAATCCGCTTATGCATCTAAACTTGAT |
CUST_1472_PI426222305 | JHI_St_60k_v1 | DMT400003637 | ATTGTTCATGATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCT |
Microarray Signals from CUST_1373_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 39.5984 | 3.99181 | 0.981618 | 0.0925149 |
ABA 1h | 18.3892 | 6.70556 | 0.434411 | 0.206198 |
ACC 1h | 127.457 | 53.5693 | 2.42523 | 1.3572 |
BABA 1h | 33.0166 | 9.53143 | 0.767244 | 0.202257 |
Chitin 1h | 20.15 | 3.11329 | 0.550783 | 0.0883617 |
Epi 1h | 35.9902 | 5.40548 | 1.01438 | 0.152877 |
SA 1h | 113.545 | 7.18628 | 2.76065 | 0.274526 |
Me-JA 1h | 8.98828 | 2.99446 | 0.269174 | 0.0972604 |
Control 6h | 99.6047 | 31.8697 | 2.1361 | 0.776213 |
ABA 6h | 36.358 | 3.73512 | 0.85198 | 0.0883307 |
ACC 6h | 56.252 | 18.7022 | 1.10761 | 0.218931 |
BABA 6h | 59.6812 | 13.3361 | 1.26277 | 0.260768 |
Chitin 6h | 54.7314 | 4.56479 | 1.28594 | 0.10725 |
Epi 6h | 72.5475 | 13.8143 | 1.5465 | 0.422974 |
SA 6h | 39.4534 | 8.95295 | 0.944153 | 0.131235 |
Me-JA 6h | 38.4884 | 11.6279 | 0.889833 | 0.213835 |
Source Transcript PGSC0003DMT400003636 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | Solyc02g088340.2 | +2 | 9e-28 | 109 | 51/54 (94%) | genomic_reference:SL2.50ch02 gene_region:45045827-45048579 transcript_region:SL2.50ch02:45045827..45048579- go_terms:GO:0005515,GO:0003700 functional_description:WRKY transcription factor-c (AHRD V1 **** Q5DJV3_CAPAN); contains Interpro domain(s) IPR003657 DNA-binding WRKY |
TAIR PP10 | AT3G01080.1 | +2 | 2e-17 | 80 | 34/44 (77%) | WRKY DNA-binding protein 58 | chr3:25507-27449 FORWARD LENGTH=423 |